Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 RN7SL561P-201ENST00000488553 281 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 AC105420.1-201ENST00000504389 582 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC6.23□□□□□ -1.41
PDGFBP01127 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.23□□□□□ -1.41
PDGFBP01127 AC108136.1-201ENST00000530350 631 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFBP01127 AC092865.1-201ENST00000544395 1023 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 AC090286.3-201ENST00000573133 187 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.23□□□□□ -1.41
PDGFBP01127 ELOCP28-201ENST00000590044 317 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.23□□□□□ -1.41
PDGFBP01127 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFBP01127 FAM27E4-201ENST00000605259 342 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFBP01127 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC6.23□□□□□ -1.41
PDGFBP01127 CEP85L-204ENST00000392500 1872 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 AL450423.1-201ENST00000615176 1857 ntTSL 2 BASIC6.23□□□□□ -1.41
PDGFBP01127 ERVFRD-1-201ENST00000472091 3198 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 AC138915.4-201ENST00000565549 4147 ntBASIC6.23□□□□□ -1.41
PDGFBP01127 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 MED12L-206ENST00000474524 10744 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PDGFBP01127 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PDGFBP01127 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC6.22□□□□□ -1.41
PDGFBP01127 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 LINC00624-201ENST00000619867 3088 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 AC011416.1-201ENST00000514947 1732 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 BBOX1-205ENST00000529202 1725 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
PDGFBP01127 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFBP01127 INTS2-202ENST00000444766 5878 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 SRGAP1-206ENST00000543397 5652 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC6.22□□□□□ -1.41
PDGFBP01127 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
PDGFBP01127 RN7SKP124-201ENST00000364730 341 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 AL645927.1-201ENST00000396783 406 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 RPL35AP24-201ENST00000413846 330 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 AL355357.1-201ENST00000433531 417 ntTSL 2 BASIC6.22□□□□□ -1.41
PDGFBP01127 AC012075.1-201ENST00000436549 580 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 TRIM60P16-201ENST00000444048 694 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 MORF4-201ENST00000447135 971 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 AC007386.1-201ENST00000455212 582 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 AC026826.1-201ENST00000493002 361 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 RPS26P24-201ENST00000497656 331 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 AC078788.1-201ENST00000498457 634 ntTSL 3 BASIC6.22□□□□□ -1.41
PDGFBP01127 SSX8-201ENST00000506270 579 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.22□□□□□ -1.41
PDGFBP01127 INTS9-AS1-201ENST00000520055 548 ntTSL 5 BASIC6.22□□□□□ -1.41
PDGFBP01127 FXNP1-201ENST00000555153 337 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 AP002884.5-201ENST00000595053 1132 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 AC131009.3-201ENST00000621809 287 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
PDGFBP01127 AC009237.3-203ENST00000442128 3551 ntBASIC6.22□□□□□ -1.41
PDGFBP01127 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 ARPP21-201ENST00000187397 3433 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
PDGFBP01127 AC105105.2-201ENST00000590797 4521 ntTSL 2 BASIC6.22□□□□□ -1.41
PDGFBP01127 ZNF227-213ENST00000621083 3055 ntAPPRIS P1 TSL 2 BASIC6.22□□□□□ -1.41
PDGFBP01127 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.41
PDGFBP01127 PPP2R3A-201ENST00000264977 6795 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDGFBP01127 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.21□□□□□ -1.41
PDGFBP01127 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
PDGFBP01127 AC092725.2-201ENST00000567658 1389 ntBASIC6.21□□□□□ -1.41
PDGFBP01127 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
PDGFBP01127 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFBP01127 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFBP01127 AC007485.2-201ENST00000623493 1667 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 PABPC1P6-201ENST00000445594 1829 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 CACNB2-207ENST00000377329 3396 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFBP01127 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFBP01127 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFBP01127 FABP12P1-201ENST00000401911 322 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 BMS1P17-202ENST00000416720 316 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 AL590762.4-201ENST00000425885 253 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFBP01127 RPL35AP28-201ENST00000459730 331 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.21□□□□□ -1.42
PDGFBP01127 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
PDGFBP01127 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC6.21□□□□□ -1.42
PDGFBP01127 MINCR-206ENST00000524335 499 ntTSL 2 BASIC6.21□□□□□ -1.42
PDGFBP01127 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFBP01127 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFBP01127 AL136131.3-201ENST00000607600 188 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.21□□□□□ -1.42
PDGFBP01127 AC090510.2-201ENST00000617465 629 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 AC005393.1-201ENST00000617916 584 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 AL357562.1-201ENST00000624911 609 ntBASIC6.21□□□□□ -1.42
PDGFBP01127 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 383.3 ms