Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AL022323.4-201ENST00000623980 13120 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 RRH-201ENST00000317735 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 LINC01362-202ENST00000452901 1712 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 SAMD13-204ENST00000370671 724 ntTSL 3 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AL096829.1-201ENST00000413677 457 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 RPS15AP30-201ENST00000420976 390 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 RPEP4-201ENST00000437636 602 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC234771.2-201ENST00000445718 597 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AL445991.1-201ENST00000450381 475 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 snoU13.29-201ENST00000459370 104 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 CCDC11P1-201ENST00000503137 1162 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC095052.1-201ENST00000509955 863 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 CASP1P2-201ENST00000526830 1258 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC026790.2-201ENST00000606282 430 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AL138960.1-201ENST00000613838 513 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 MIR6811-201ENST00000620409 58 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 PKN2-202ENST00000370513 2890 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 CLHC1-204ENST00000407122 2139 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 AC005224.3-201ENST00000584683 2140 ntBASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
TCRBV7S3A2A0A539 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 TTC41P-205ENST00000551270 3963 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 FUNDC2P3-201ENST00000334716 533 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AL589655.1-201ENST00000405398 482 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 RN7SKP108-201ENST00000411367 328 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC003685.1-201ENST00000440430 466 ntTSL 2 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 SEPT14P12-201ENST00000442280 560 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AL590004.3-202ENST00000445883 451 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF619P1-201ENST00000446539 752 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 SDC4P-201ENST00000453285 601 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 Z99916.1-201ENST00000454253 482 ntTSL 3 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 ACA64.4-201ENST00000459070 127 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 TRBV8-1-201ENST00000481590 279 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 RPL23AP40-201ENST00000487630 390 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC112206.4-201ENST00000515142 405 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 RNU2-45P-201ENST00000516068 187 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AL136520.1-202ENST00000555494 763 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC012414.2-201ENST00000559474 187 ntBASIC6.16□□□□□ -1.42
TCRBV7S3A2A0A539 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms