Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 RNA5SP251-201ENST00000410614 137 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 RPSAP65-201ENST00000429660 595 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AK3P5-201ENST00000432033 519 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AL512593.1-201ENST00000444758 779 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 BCAP29-207ENST00000445771 1157 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 RNU7-157P-201ENST00000459600 66 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AC008945.1-201ENST00000505144 499 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 MAST4-IT1-201ENST00000514241 658 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AL845552.1-201ENST00000556820 323 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AC002519.2-203ENST00000567043 837 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 RFPL4AP6-201ENST00000616792 846 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AC018659.2-201ENST00000624690 715 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AC005725.1-201ENST00000577346 2607 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AC027575.3-201ENST00000583058 2747 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 AL731532.1-201ENST00000623972 4236 ntBASIC5.79□□□□□ -1.48
ATG4BQ9Y4P1 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 SNORA21-201ENST00000362423 132 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 RNU6-167P-201ENST00000384292 106 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AL050305.1-201ENST00000399993 1230 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AL096829.1-201ENST00000413677 457 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC015977.1-201ENST00000418887 292 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC016027.5-201ENST00000427227 210 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 PCNPP2-201ENST00000441651 455 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 RPL5P7-201ENST00000444235 813 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 SEPHS1P4-201ENST00000446112 1176 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 HMGB1P7-201ENST00000450921 612 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 OR7E99P-201ENST00000505750 922 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 TPM3P3-201ENST00000521343 354 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 BCAS2P1-201ENST00000528022 632 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC006512.2-201ENST00000543250 486 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC093525.4-201ENST00000562232 459 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC145285.4-201ENST00000568183 540 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AL138960.1-201ENST00000613838 513 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC119674.1-202ENST00000641333 1860 ntBASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 MS4A7-211ENST00000534016 1378 ntTSL 2 BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
ATG4BQ9Y4P1 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
ATG4BQ9Y4P1 Z95114.1-201ENST00000624264 14574 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AL662795.2-201ENST00000624252 3706 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 MIPEPP2-201ENST00000422560 1819 ntBASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.77□□□□□ -1.49
ATG4BQ9Y4P1 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms