Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 RNU6-941P-201ENST00000516346 108 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 SAA3P-201ENST00000533267 365 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC091042.1-201ENST00000579213 173 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC015849.2-201ENST00000605738 409 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC000068.2-201ENST00000608816 460 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 SOX5-205ENST00000451604 4261 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 COA1-203ENST00000395879 2448 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 MFSD8-219ENST00000641228 2559 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 RC3H1-203ENST00000367696 11261 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AL357752.1-201ENST00000412817 349 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC115285.1-201ENST00000424879 736 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 OR4C10P-201ENST00000434991 931 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC006205.1-201ENST00000538067 389 ntTSL 2 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 CPSF7-220ENST00000541963 549 ntTSL 4 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AL034374.2-201ENST00000605281 548 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 WBP1LP8-201ENST00000617401 327 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 MIR7159-201ENST00000620587 66 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 DCP2-208ENST00000515408 8029 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 TGFBR3-202ENST00000370399 4550 ntAPPRIS ALT1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 BDNF-206ENST00000395983 3776 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 PDE4B-206ENST00000423207 4546 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC016251.1-201ENST00000624299 4198 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 LUC7L2-201ENST00000263545 2287 ntTSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 CUX1-201ENST00000292535 13747 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 CDC42BPA-205ENST00000366769 10855 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 HRH1-201ENST00000397056 4711 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 RNU1-77P-201ENST00000390868 162 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC009229.2-201ENST00000417213 351 ntTSL 3 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 CUBNP2-201ENST00000443534 1139 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AL136097.1-201ENST00000456945 913 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC022415.1-202ENST00000486612 523 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC006511.5-202ENST00000546339 1198 ntTSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC106730.2-201ENST00000566641 540 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC087575.1-201ENST00000585087 229 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 ZYXP1-201ENST00000617638 118 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 FMO4-201ENST00000367749 2252 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 PDE4DIP-237ENST00000585156 8439 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 SPARCL1-201ENST00000282470 2906 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 ZNF571-205ENST00000590751 1700 ntTSL 2 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 TCP11-207ENST00000418521 1575 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 CDY7P-201ENST00000429883 1604 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 SLC23A2-201ENST00000338244 6944 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 RNA5SP372-201ENST00000390836 115 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 PRUNEP1-201ENST00000425846 705 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 EIF3KP3-201ENST00000514461 639 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 OR4C7P-201ENST00000533375 919 ntBASIC2.35□□□□□ -2.03
MACF1Q9UPN3 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 OR10A3-202ENST00000642047 2650 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 PTPRM-202ENST00000400053 5292 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 BCOR-205ENST00000397354 6258 ntAPPRIS P3 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 SMIM2-AS1-203ENST00000618753 2101 ntTSL 4 BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 FN1-211ENST00000443816 7762 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
MACF1Q9UPN3 ZNF195-203ENST00000343338 3145 ntAPPRIS ALT2 TSL 4 BASIC2.34□□□□□ -2.03
MACF1Q9UPN3 RASGRF1-201ENST00000394745 2850 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
MACF1Q9UPN3 RASGEF1B-214ENST00000638048 2386 ntTSL 5 BASIC2.34□□□□□ -2.03
MACF1Q9UPN3 AC004074.1-201ENST00000421810 1063 ntBASIC2.34□□□□□ -2.03
MACF1Q9UPN3 DSTNP5-201ENST00000427921 523 ntBASIC2.34□□□□□ -2.03
MACF1Q9UPN3 RBMY2TP-201ENST00000451162 947 ntBASIC2.34□□□□□ -2.03
MACF1Q9UPN3 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.34□□□□□ -2.03
MACF1Q9UPN3 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
MACF1Q9UPN3 AP005205.1-201ENST00000563503 508 ntBASIC2.34□□□□□ -2.03
MACF1Q9UPN3 AC026951.2-201ENST00000613847 241 ntBASIC2.34□□□□□ -2.03
MACF1Q9UPN3 DCAF7-205ENST00000614556 6340 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
MACF1Q9UPN3 AP001541.1-201ENST00000623322 1904 ntBASIC2.34□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms