Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 GCSAM-204ENST00000484193 1036 ntAPPRIS ALT1 TSL 2 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AC110056.1-201ENST00000525759 911 ntBASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 BCAS2P1-201ENST00000528022 632 ntBASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AC092332.1-201ENST00000563684 829 ntBASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AC007346.1-201ENST00000569208 867 ntBASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AP001052.1-201ENST00000626421 99 ntBASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 USP40-202ENST00000409945 1946 ntTSL 2 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 GNL2P1-201ENST00000451274 2190 ntBASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 BRAFP1-201ENST00000445336 2703 ntBASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 AL162726.3-201ENST00000637606 1301 ntTSL 5 BASIC6.75□□□□□ -1.33
CCSER1Q9C0I3 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC005224.3-201ENST00000584683 2140 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 FUNDC2P3-201ENST00000334716 533 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 RNA5SP211-201ENST00000365516 117 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 RPL35AP3-201ENST00000414680 288 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC007679.3-201ENST00000434035 414 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AL353662.1-201ENST00000439099 327 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 OR52I1-201ENST00000450052 1050 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 TNS3-209ENST00000458317 1156 ntTSL 5 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC104164.1-201ENST00000460282 590 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 TRBV5-2-201ENST00000489095 273 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC083795.1-201ENST00000491760 320 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 IGKV3D-25-201ENST00000519599 235 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC093524.1-201ENST00000564266 1094 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC073333.2-201ENST00000603589 769 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 uc_338.26-201ENST00000612659 160 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 AC073592.6-201ENST00000624271 415 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 MTCO1P28-201ENST00000574177 1528 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 CAP1P2-201ENST00000417455 1409 ntBASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
CCSER1Q9C0I3 NCOA4P2-201ENST00000340589 1813 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AL449283.1-201ENST00000602631 3403 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 HSPD1P9-201ENST00000420325 1636 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 RNU6-316P-201ENST00000391027 107 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 GCNT1P4-201ENST00000404096 329 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AL096711.1-201ENST00000404780 554 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 USP24P1-201ENST00000433802 779 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 RPS3AP38-201ENST00000435889 763 ntBASIC6.73□□□□□ -1.33
CCSER1Q9C0I3 AC009879.1-201ENST00000520029 839 ntBASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms