Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 ACA64.6-201ENST00000516310 117 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC090572.1-201ENST00000519251 160 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 NRBF2P4-201ENST00000520874 850 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ST13P6-201ENST00000522430 1102 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AP003064.2-201ENST00000528983 510 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ST3GAL3-237ENST00000533933 834 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC027544.3-201ENST00000535082 757 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 IFITM9P-201ENST00000535743 396 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC025576.2-201ENST00000535806 390 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC027288.3-203ENST00000553165 448 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 OR4T1P-201ENST00000554933 911 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 RORA-AS2-202ENST00000561413 576 ntTSL 4 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC055876.4-201ENST00000562515 712 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC140658.1-201ENST00000563019 346 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 CDRT15P1-201ENST00000577632 564 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC090398.1-202ENST00000580403 457 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 MIR3194-201ENST00000582236 73 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC004253.2-201ENST00000585025 397 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AP001357.2-201ENST00000586758 710 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC098848.2-201ENST00000588023 330 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 TEX26-AS1-217ENST00000593246 797 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC123912.4-201ENST00000596996 1178 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC025278.2-201ENST00000598153 1063 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC092175.1-201ENST00000605325 200 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 PRR13P7-201ENST00000605538 430 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC018690.1-201ENST00000608144 626 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 MIR6892-201ENST00000612346 115 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC096861.1-201ENST00000616652 240 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 MIAT_exon5_1.1-201ENST00000618919 149 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 VIPR1-AS1-229ENST00000628282 515 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 MIR3160-2-201ENST00000637870 81 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 CASC19-205ENST00000641013 1411 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 KAT14-202ENST00000435364 3618 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 CNR1-204ENST00000428600 1550 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC104118.1-201ENST00000607625 1589 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ZNF807-201ENST00000328088 1707 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 TBC1D8B-206ENST00000481617 4098 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 CCT8-212ENST00000626972 1862 ntTSL 2 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 ZNF619-210ENST00000522736 2030 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 MAT1A-201ENST00000372213 3410 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AC012360.3-201ENST00000610036 3449 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 FNDC3B-201ENST00000336824 7904 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 AL391666.1-201ENST00000442570 2764 ntBASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 EPB41L1-201ENST00000202028 3514 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 DHX9-201ENST00000367549 4240 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
KRTAP3-1Q9BYR8 TNFRSF9-204ENST00000615230 5970 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 PAK5-202ENST00000378423 4613 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 NLRP3-204ENST00000366497 4318 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 BRPF1-206ENST00000457855 4308 ntAPPRIS P3 TSL 2 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 PAICS-202ENST00000399688 3297 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 PIWIL3-202ENST00000527701 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 YY1AP1-203ENST00000347088 2524 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 PPWD1-215ENST00000538977 2055 ntTSL 2 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 PRKAR1A-211ENST00000586397 1940 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 ZNF217-201ENST00000302342 5633 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 MTND5P19-201ENST00000424872 1794 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 DTNA-221ENST00000591182 1787 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 CD33-204ENST00000436584 1494 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 AL008638.6-201ENST00000623947 4254 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 ZNF652P1-201ENST00000442420 1309 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 AC109780.1-201ENST00000451768 1344 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 AMOTL1-203ENST00000433060 8970 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 SKA2-201ENST00000330137 2798 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 GNL2-201ENST00000373062 2334 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 SLC24A2-201ENST00000286344 2170 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 DET1-202ENST00000444300 2154 ntTSL 5 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 KLHL32-205ENST00000539200 3600 ntTSL 2 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 TRPM3-210ENST00000377111 4618 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 COPS4-201ENST00000264389 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 CPSF7-206ENST00000448745 1749 ntAPPRIS ALT1 TSL 5 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 CCDC102B-210ENST00000584156 1554 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 PAX6-282ENST00000640975 2553 ntAPPRIS P4 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 ZNF814-201ENST00000435989 3146 ntAPPRIS P1 TSL 2 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 DAPP1-201ENST00000296414 2955 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 RPL7A-202ENST00000323345 891 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 UBE2D3-206ENST00000357194 660 ntTSL 2 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 RNU4-7P-201ENST00000364758 141 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 CENPW-202ENST00000368326 443 ntTSL 2 BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 RNU6-657P-201ENST00000383904 107 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 RNU6-1032P-201ENST00000384100 107 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 Y_RNA.489-201ENST00000384410 101 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 Y_RNA.530-201ENST00000384587 101 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 Y_RNA.574-201ENST00000384766 95 ntBASIC4.5□□□□□ -1.69
KRTAP3-1Q9BYR8 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms