Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 STAC2-201ENST00000333461 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 GRHL3-204ENST00000361548 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 UNC45A-201ENST00000394275 4002 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 COPS7A-203ENST00000534877 1707 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 AL136115.3-201ENST00000641788 1873 ntBASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 SMG7-212ENST00000507469 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 CHPF2-201ENST00000035307 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 OARD1-210ENST00000479950 3330 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 TCP10L-201ENST00000300258 2695 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 TTC26-201ENST00000343187 2015 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 WDR47-202ENST00000361054 4115 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 PAX6-235ENST00000638629 2844 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 MC1R-203ENST00000555427 3637 ntTSL 5 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 PLA2G6-201ENST00000332509 3271 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 OR4D10-201ENST00000530162 2482 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 SLC12A3-201ENST00000262502 4208 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 RANGAP1-207ENST00000455915 4222 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
KRTAP3-3Q9BYR6 ADCY4-204ENST00000554068 3404 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 SULT1C2-201ENST00000251481 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 HDAC9-212ENST00000432645 3099 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RANBP20P-201ENST00000557256 2104 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 MAMLD1-201ENST00000262858 4607 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RSRC2-201ENST00000331738 3520 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 ELMSAN1-204ENST00000423556 3547 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 MDH1B-201ENST00000374412 2553 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 SETD4-201ENST00000332131 3015 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 GALNT17-205ENST00000618959 3012 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 PLEKHM1P1-204ENST00000582201 3166 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 ZNF436-202ENST00000374608 3788 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 NFIA-206ENST00000371191 1916 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 DGKD-202ENST00000409813 6228 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 IST1-201ENST00000329908 2356 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 NPAS3-205ENST00000547068 2531 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 CNDP2-209ENST00000579847 2653 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 ACSBG2-210ENST00000591403 2690 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 BCL2L13-201ENST00000317582 2992 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 E2F8-202ENST00000527884 3432 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 DUSP27-203ENST00000443333 4034 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 PLEKHA5-203ENST00000429027 4762 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 MIA-201ENST00000263369 632 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 CUX1-202ENST00000292538 2930 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 CNR1-201ENST00000362094 1252 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RNA5SP52-201ENST00000362448 134 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 SNORD115-8-201ENST00000363856 82 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 SNORD115-38-201ENST00000365037 82 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 ZC4H2-202ENST00000374839 2184 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 U2AF1L4-202ENST00000378975 747 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RNU6-144P-201ENST00000383951 107 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 TRBV25-1-202ENST00000390398 381 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 IGHV3-38-201ENST00000390618 426 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 CIZ1-207ENST00000393608 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 MIR889-201ENST00000401280 79 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 Y_RNA.622-201ENST00000411091 108 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 CYCSP5-201ENST00000415043 297 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RFFL-205ENST00000415395 1706 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 MAS1LP1-206ENST00000419416 1047 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 LINC01509-202ENST00000423523 408 ntTSL 3 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 KRT17P4-201ENST00000429445 819 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 OR7H1P-201ENST00000448965 922 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AC096536.2-201ENST00000450503 343 ntTSL 2 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 GEMIN2P1-201ENST00000454246 752 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RN7SL740P-201ENST00000467060 344 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RPS14P8-201ENST00000478778 369 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 MYLK-AS1-203ENST00000485162 587 ntTSL 4 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RN7SL268P-201ENST00000491172 298 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RNA5SP288-201ENST00000516075 93 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 RNU1-104P-201ENST00000517280 175 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 IGHVII-15-1-201ENST00000517931 220 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 BIN3-210ENST00000522268 321 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AC022784.6-202ENST00000523246 674 ntTSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AP006437.2-201ENST00000528000 345 ntTSL 3 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 HHLA3-207ENST00000531950 541 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 TOMM20P1-201ENST00000534518 427 ntBASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 BCL2L2-PABPN1-201ENST00000553781 1241 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
KRTAP3-3Q9BYR6 AL132709.1-205ENST00000556136 551 ntTSL 4 BASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 137.3 ms