Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 OPALIN-206ENST00000611913 3115 ntTSL 5 BASIC2.73□□□□□ -1.97
KRTAP4-3Q9BYR4 CREB3L2-207ENST00000616381 7133 ntTSL 5 BASIC2.73□□□□□ -1.97
KRTAP4-3Q9BYR4 CDH7-202ENST00000397968 12231 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRTAP4-3Q9BYR4 ZNF790-208ENST00000615484 2451 ntAPPRIS P1 TSL 5 BASIC2.73□□□□□ -1.97
KRTAP4-3Q9BYR4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.73□□□□□ -1.97
KRTAP4-3Q9BYR4 AC092447.10-201ENST00000620607 1652 ntBASIC2.73□□□□□ -1.97
KRTAP4-3Q9BYR4 SRL-201ENST00000399609 4214 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
KRTAP4-3Q9BYR4 EXOC5-211ENST00000621441 10589 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 ZNF300P1-201ENST00000356555 1822 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 DYNC1I2P1-201ENST00000435916 1838 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL591379.1-201ENST00000315293 3739 ntTSL 2 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 TAF1A-201ENST00000350027 1966 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 LAMP2-202ENST00000371335 4030 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 BDNF-204ENST00000395980 4030 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 PSMC2-203ENST00000435765 3054 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 USP37-204ENST00000418019 3353 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 ZNF259P1-202ENST00000572422 4912 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 SLC5A1-201ENST00000266088 5061 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 NLRP3-203ENST00000366496 3996 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 ATP8A2-204ENST00000381655 9575 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 DUXAP8-204ENST00000447898 4136 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 BEST3-205ENST00000488961 2878 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 XRCC6P3-201ENST00000422187 1621 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 CD46-208ENST00000367042 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 MAP3K19-205ENST00000392917 1765 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 MEF2C-229ENST00000627659 2393 ntTSL 5 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RIF1-205ENST00000444746 7897 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 SAR1A-205ENST00000373242 5981 ntAPPRIS P1 TSL 2 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 SNHG14-210ENST00000546682 8842 ntTSL 5 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 CLEC2B-201ENST00000228438 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 HNRNPCL4-201ENST00000323770 882 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 OR4N4-201ENST00000328795 1126 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RNU4-21P-201ENST00000362802 126 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 Y_RNA.150-201ENST00000363562 102 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RN7SKP208-201ENST00000365474 361 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RNU6-81P-201ENST00000365608 104 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL390760.1-201ENST00000366188 410 ntTSL 5 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 PYHIN1-202ENST00000368138 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 S100A5-202ENST00000368718 710 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 EPHA7-201ENST00000369297 1885 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 IKZF2-202ENST00000374319 2001 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 ALOX5AP-201ENST00000380490 904 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 Y_RNA.402-201ENST00000383972 102 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 Y_RNA.445-201ENST00000384168 102 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 SNORA51.12-201ENST00000384448 134 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RNU6-1117P-201ENST00000384525 104 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 Y_RNA.557-201ENST00000384680 107 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 Y_RNA.573-201ENST00000384763 105 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RNA5SP18-201ENST00000390935 121 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 MCTS2P-201ENST00000394552 546 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 CCR3-202ENST00000395940 1581 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AC133644.1-201ENST00000398171 937 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL080285.1-201ENST00000404225 984 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 PKMP3-201ENST00000405497 715 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 NCSTNP1-201ENST00000406229 144 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL354719.1-201ENST00000406535 843 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL590084.1-201ENST00000407885 387 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RN7SKP89-201ENST00000410774 242 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 GSTA10P-201ENST00000412182 576 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RSU1P3-201ENST00000412878 835 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RPL12P27-201ENST00000414870 496 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 CYP1D1P-201ENST00000416662 1433 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AC011753.4-201ENST00000417974 311 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 ELMO1-AS1-201ENST00000419535 528 ntTSL 4 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 MTCO2P27-201ENST00000420740 428 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 ELOCP14-201ENST00000428070 331 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 RPL12P4-201ENST00000432629 497 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 GAPDHP75-201ENST00000433910 943 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL441943.1-201ENST00000435539 432 ntTSL 3 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 FABP5P10-201ENST00000435729 408 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL049646.2-201ENST00000436848 258 ntTSL 2 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 ELOCP7-201ENST00000439968 331 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AC091730.1-201ENST00000440455 692 ntTSL 3 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AL355355.1-201ENST00000442900 793 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 ARMC8P1-201ENST00000443069 1289 ntBASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 CD59-206ENST00000445143 825 ntAPPRIS P2 TSL 3 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC2.72□□□□□ -1.97
KRTAP4-3Q9BYR4 LIX1L-AS1-206ENST00000447686 846 ntTSL 2 BASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms