Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 ACVR1-202ENST00000409283 2879 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 AC012354.1-201ENST00000425325 2685 ntTSL 3 BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 ADGRE3-201ENST00000253673 2254 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 ANKRD20A11P-206ENST00000451663 3717 ntBASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.17
COL25A1Q9BXS0 TARS-202ENST00000455217 2523 ntTSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 FAM186A-204ENST00000543111 8200 ntAPPRIS ALT2 TSL 5 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 NEDD4L-204ENST00000382850 8251 ntAPPRIS ALT2 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 RNU6-931P-201ENST00000363850 107 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 OR1L1-202ENST00000373686 1083 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 RNA5SP280-201ENST00000411230 115 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 RANP6-201ENST00000413691 644 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 BX510359.3-201ENST00000422168 306 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AL353729.1-201ENST00000425044 720 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 ZYG11AP1-201ENST00000430329 837 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 TRIM60P16-201ENST00000444048 694 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AP000472.1-201ENST00000452500 530 ntTSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 MIR4432HG-202ENST00000453476 703 ntTSL 3 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 RPS27AP2-201ENST00000457576 465 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 RN7SL74P-201ENST00000464966 299 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC005017.1-201ENST00000482002 490 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC105252.1-201ENST00000503089 286 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 PANCR-202ENST00000513690 448 ntTSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 OR4A12P-201ENST00000530847 918 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC010653.1-201ENST00000571108 881 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 RN7SL667P-201ENST00000582817 298 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC008521.2-201ENST00000591021 259 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 COX6CP4-201ENST00000605798 228 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC090425.1-201ENST00000610007 140 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 RMST_10.1-201ENST00000616309 154 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 LINC01742-201ENST00000616333 628 ntTSL 3 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC127070.5-201ENST00000623177 2104 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 MIR4278-201ENST00000636094 69 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC011471.4-201ENST00000638271 216 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 RAD9B-203ENST00000409246 2794 ntTSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 FAM20A-207ENST00000619787 2798 ntTSL 5 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 OGDH-207ENST00000449767 3479 ntAPPRIS ALT1 TSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 MSH4-201ENST00000263187 3266 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 DYRK4-211ENST00000540757 3272 ntAPPRIS P2 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 ANKUB1-201ENST00000446160 2419 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 AKAP4-202ENST00000376064 2864 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 TYW1-201ENST00000359626 3348 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 RFT1-201ENST00000296292 5108 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 MBTPS2-201ENST00000365779 4457 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 PWAR5-201ENST00000624480 3180 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 NEDD4L-209ENST00000456986 8436 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 MTND5P11-201ENST00000511037 1812 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 EEF1A1P26-201ENST00000458319 1363 ntBASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 HOXA1-201ENST00000343060 2517 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
COL25A1Q9BXS0 MEP1B-204ENST00000581447 2308 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AC024600.1-201ENST00000425902 2572 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 NAP1L3-202ENST00000475430 2555 ntAPPRIS ALT2 TSL 2 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 FASLG-202ENST00000367721 1888 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 ZNF385B-203ENST00000409692 2109 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 GTF3C3-201ENST00000263956 4282 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 NR1I3-202ENST00000367980 1403 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 ZBTB14-207ENST00000614697 3341 ntAPPRIS P1 TSL 2 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 GFRAL-201ENST00000340465 1911 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 NUDT13-203ENST00000372997 1919 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 SYNE1-211ENST00000413186 4860 ntTSL 5 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 PPFIA2-216ENST00000549396 5363 ntAPPRIS P4 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 TEX21P-201ENST00000447107 1476 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AL031118.1-201ENST00000607727 2955 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 RBM12B-202ENST00000517700 6001 ntAPPRIS ALT2 TSL 1 (best) BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 OR2AE1-201ENST00000316368 1071 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 OR10J3-201ENST00000332217 990 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 DNM1P46-201ENST00000341853 3831 ntTSL 2 BASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 RN7SKP275-201ENST00000364626 301 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AL353625.1-202ENST00000366273 571 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AL096711.1-201ENST00000404780 554 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AL603908.1-201ENST00000406098 201 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 EIF4A1P1-201ENST00000420241 934 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 ZBTB8OSP2-201ENST00000423890 504 ntBASIC7.7□□□□□ -1.18
COL25A1Q9BXS0 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC7.7□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms