Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 RNA5SP211-201ENST00000365516 117 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 CAV1-203ENST00000393468 845 ntAPPRIS ALT1 TSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AL354868.1-201ENST00000417077 482 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AL590004.3-202ENST00000445883 451 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 FRG2FP-204ENST00000453982 852 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 RBMY2HP-201ENST00000457961 720 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC104164.1-201ENST00000460282 590 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC128716.1-201ENST00000475129 166 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC079080.1-201ENST00000479841 822 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC117500.1-201ENST00000497352 755 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC126615.2-201ENST00000553003 515 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AL049870.3-201ENST00000555157 360 ntTSL 2 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC060780.2-201ENST00000589047 198 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC025857.2-201ENST00000602711 238 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 SMIM12P1-201ENST00000603004 274 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AL034374.2-201ENST00000605281 548 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 U91328.4-201ENST00000608919 517 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 Metazoa_SRP.38-201ENST00000615981 254 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AC096861.1-201ENST00000616652 240 ntBASIC5□□□□□ -1.61
HDHD3Q9BSH5 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC5□□□□□ -1.61
HDHD3Q9BSH5 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 ATP13A4-204ENST00000400270 1458 ntTSL 1 (best) BASIC5□□□□□ -1.61
HDHD3Q9BSH5 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 C5orf63-201ENST00000296662 966 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 RNU11-201ENST00000387069 134 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 CEACAM1-208ENST00000403461 1263 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AL132671.1-201ENST00000415736 308 ntTSL 3 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 RPL35AP31-201ENST00000418340 337 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 RPEP4-201ENST00000437636 602 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC096632.2-201ENST00000438139 1239 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AL445623.1-201ENST00000440888 237 ntTSL 3 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC245291.3-201ENST00000443400 292 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC022730.1-201ENST00000473114 568 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 PFN1P6-201ENST00000476786 399 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC011396.3-201ENST00000508845 512 ntTSL 3 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 SNX18P25-201ENST00000510539 758 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 COPZ1-218ENST00000553231 551 ntTSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC090826.1-203ENST00000569235 490 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AL360012.1-201ENST00000602813 131 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AL645933.2-201ENST00000606743 1207 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 MIR6883-201ENST00000614952 78 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AL049634.1-201ENST00000453770 1720 ntBASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
HDHD3Q9BSH5 AC022306.1-201ENST00000560489 1562 ntBASIC4.99□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 102.5 ms