Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 AC112255.1-201ENST00000624070 2493 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 RIOK2-202ENST00000508447 2149 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 IGF1R-201ENST00000268035 11803 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 SNORA17.1-201ENST00000362945 126 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 BTBD9-203ENST00000403056 1155 ntTSL 5 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 RPS27AP3-201ENST00000453803 454 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC114728.1-201ENST00000488289 483 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC011453.2-201ENST00000603737 729 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC000068.2-201ENST00000608816 460 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC024651.2-201ENST00000562480 2098 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 IQCB2P-201ENST00000401788 1633 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 HSPA8P18-201ENST00000439846 1928 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 SH3PXD2A-202ENST00000355946 11245 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC011455.2-201ENST00000599320 3336 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 AC020658.2-201ENST00000559030 4020 ntBASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 C1QTNF7-204ENST00000429690 4464 ntAPPRIS P1 TSL 4 BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 PAPOLG-201ENST00000238714 4263 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 RPRD2-203ENST00000401000 7605 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CSMD1Q96PZ7 RNA5SP123-201ENST00000363244 119 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 RNA5SP515-201ENST00000364570 118 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 CRP-204ENST00000368112 787 ntTSL 2 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AL133173.1-201ENST00000423458 397 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 GTF2IP11-201ENST00000526931 420 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC068790.7-201ENST00000602347 528 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AL020997.2-201ENST00000602607 184 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC091193.1-201ENST00000604640 448 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 MIR6780A-201ENST00000615089 68 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 OR52H1-202ENST00000641796 1061 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 ELP4-218ENST00000639570 5795 ntTSL 5 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 BTN3A2-203ENST00000396934 3672 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 OR2L13-202ENST00000641714 1948 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 ZNF471-202ENST00000591537 5859 ntTSL 2 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AR-201ENST00000374690 10652 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC068389.1-202ENST00000526470 3564 ntTSL 2 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 TLK2-214ENST00000582809 3608 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AL731661.2-201ENST00000448824 806 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 MRPS21P7-201ENST00000566937 238 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC136624.4-201ENST00000573044 370 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC021079.1-201ENST00000625268 907 ntTSL 3 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 NCOA4P3-201ENST00000513203 1877 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 SYNE1-206ENST00000367253 5189 ntTSL 5 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 TOGARAM1-201ENST00000361462 6375 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 MAPK10-341ENST00000641657 3860 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 LNPK-201ENST00000272748 7610 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 SYNPO2-206ENST00000610556 3934 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 HMGB3P24-201ENST00000433260 622 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 KCTD10P1-201ENST00000434203 625 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC073264.2-201ENST00000448886 166 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 GRIK1-AS1-205ENST00000455392 767 ntTSL 3 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 SCARNA6.1-201ENST00000516989 238 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 AC009948.3-201ENST00000603415 1798 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 TMTC3-201ENST00000266712 7203 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 LAMB4-202ENST00000388781 5858 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 DST-206ENST00000370788 17657 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 SMG1P5-202ENST00000529428 4219 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 SMG1P2-201ENST00000566127 4221 ntBASIC4.86□□□□□ -1.63
CSMD1Q96PZ7 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 SDK2-201ENST00000392650 10723 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 EMP1-201ENST00000256951 5921 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC4.85□□□□□ -1.63
CSMD1Q96PZ7 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC4.85□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms