Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 RPL36AP55-201ENST00000454114 305 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 ANKRD26P4-201ENST00000455755 950 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 GTF2IP12-201ENST00000456547 356 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 C2orf74-204ENST00000464909 726 ntAPPRIS P2 TSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RPSAP48-201ENST00000466509 889 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RPSAP39-201ENST00000467439 883 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RPL7AP30-201ENST00000482859 796 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RN7SL797P-201ENST00000486314 297 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RPL21P42-201ENST00000488408 464 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC093755.1-201ENST00000512950 1023 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC119751.1-201ENST00000513357 765 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC079209.1-201ENST00000519412 820 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 DDHD2-219ENST00000529845 945 ntTSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AP004607.5-201ENST00000532034 217 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 PDCL2P2-201ENST00000533651 189 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 RAB3IP-214ENST00000550847 670 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 CCDC178-208ENST00000579916 1017 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC015845.2-201ENST00000581805 472 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC005208.1-202ENST00000587325 725 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AP001269.3-201ENST00000588718 329 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC009237.15-201ENST00000610252 501 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC009283.1-201ENST00000615852 645 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC091931.1-201ENST00000623488 728 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC079248.2-201ENST00000623779 326 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC091965.5-201ENST00000624785 342 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 OR4X2-201ENST00000624868 1025 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 ASB8-218ENST00000629941 278 ntTSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC087565.2-201ENST00000637695 952 ntTSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 TMEM75-201ENST00000624314 2165 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AL358913.2-201ENST00000553881 1548 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 PRND-201ENST00000305817 3980 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 MTCO1P25-201ENST00000414449 1799 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 GRIA3-204ENST00000541091 2740 ntAPPRIS P5 TSL 1 (best) BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 AC025263.3-201ENST00000622965 1396 ntBASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
PTCHD1Q96NR3 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC119674.1-202ENST00000641333 1860 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL157831.2-201ENST00000564681 3095 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL365204.1-201ENST00000423440 1430 ntTSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SMG1-210ENST00000565224 2372 ntTSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 YES1-201ENST00000314574 4441 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC132825.1-201ENST00000463573 2247 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 CTPS1-201ENST00000372616 2037 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC036214.3-201ENST00000522938 1527 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RNU6-1017P-201ENST00000363613 106 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RNA5SP429-201ENST00000363688 109 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RNA5SP114-201ENST00000363780 113 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RNU6-304P-201ENST00000364855 107 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RN7SKP55-201ENST00000364888 307 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 MIR27A-201ENST00000385073 78 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 RSPH14-202ENST00000406876 519 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 MICG-208ENST00000416822 132 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 BTF3P9-201ENST00000418784 283 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 ZBTB8OSP2-201ENST00000423890 504 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL121916.1-201ENST00000429405 308 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL360221.1-201ENST00000445989 335 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC019186.1-201ENST00000447019 545 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 OR52J1P-201ENST00000450596 932 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 OR2AF1P-201ENST00000454899 889 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SRP68P2-201ENST00000456184 254 ntBASIC6.68□□□□□ -1.34
PTCHD1Q96NR3 SNORA81.1-201ENST00000458922 177 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 105.3 ms