Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 BFSP2-AS1-201ENST00000515542 894 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 TRIM77BP-201ENST00000524985 1119 ntBASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC005736.2-201ENST00000571302 774 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AP001267.4-201ENST00000602598 545 ntBASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC108865.2-201ENST00000606881 432 ntBASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC022106.1-201ENST00000612834 766 ntBASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 SHQ1P1-201ENST00000437111 1544 ntBASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AP002512.4-202ENST00000641599 4530 ntBASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC5.21□□□□□ -1.58
CLDND2Q8NHS1 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 Z95114.1-201ENST00000624264 14574 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC025470.1-201ENST00000510053 2032 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 MTCO1P28-201ENST00000574177 1528 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 RNU1-49P-201ENST00000363468 159 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 MIR323B-201ENST00000385269 82 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC092642.1-201ENST00000392417 425 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 PTPN20-208ENST00000395727 790 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC066692.1-201ENST00000421721 457 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 RPS29P14-201ENST00000431518 171 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 PPIAP10-201ENST00000438675 458 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 MORF4-201ENST00000447135 971 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC002553.3-201ENST00000453002 341 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC109454.2-201ENST00000503470 520 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC025458.1-201ENST00000506046 166 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC090958.1-201ENST00000511122 351 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 RN7SKP238-201ENST00000516483 249 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 Y_RNA.710-201ENST00000516975 110 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC009120.3-201ENST00000563335 499 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 AC105235.1-201ENST00000623208 1816 ntBASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDND2Q8NHS1 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 SNORA21-201ENST00000362423 132 ntBASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 HMGN1P20-201ENST00000411849 300 ntBASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 AL390879.1-201ENST00000439143 386 ntBASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.19□□□□□ -1.58
CLDND2Q8NHS1 VPS25P1-201ENST00000455691 508 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms