Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AL133325.1-201ENST00000421090 382 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC006366.1-201ENST00000422002 759 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 CYP4F34P-201ENST00000425951 481 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC124944.2-201ENST00000429866 1242 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 NIP7P1-201ENST00000433227 512 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 SEPT14P24-201ENST00000447236 180 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 MRPL35P2-201ENST00000448009 511 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 GAPDHP16-201ENST00000448152 962 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 RAB28P3-201ENST00000448325 597 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AL929410.2-201ENST00000451170 189 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 NDUFB4P1-201ENST00000462398 381 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 SYPL1P1-201ENST00000473622 768 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 RPL23AP8-201ENST00000479812 475 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 NAA50-206ENST00000493454 964 ntTSL 2 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC021088.1-201ENST00000506519 805 ntTSL 3 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 RNA5SP303-201ENST00000516192 130 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC060788.1-201ENST00000521318 469 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AP002004.1-206ENST00000532441 876 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC091304.5-201ENST00000568969 158 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC004494.1-202ENST00000573820 480 ntTSL 4 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 SCIMP-204ENST00000574297 569 ntAPPRIS ALT2 TSL 3 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC090616.2-202ENST00000584248 222 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC063962.1-201ENST00000608199 521 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC018755.4-201ENST00000619715 454 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC015804.1-201ENST00000622935 435 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC092159.4-201ENST00000624944 550 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AL049541.2-201ENST00000626377 555 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 FGA-201ENST00000302053 3678 ntAPPRIS P1 TSL 2 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 MORC3-201ENST00000400485 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 ACKR2-201ENST00000422265 2956 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 SLC4A10-201ENST00000272716 3414 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 ANKS4B-201ENST00000311620 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 RACGAP1-221ENST00000551016 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 CSDE1-201ENST00000261443 3228 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 CHORDC1-201ENST00000320585 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 ZNF849P-201ENST00000594711 1566 ntBASIC6.61□□□□□ -1.35
NUP43Q8NFH3 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC6.61□□□□□ -1.35
NUP43Q8NFH3 AC011503.2-201ENST00000594230 1500 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 SPATA31B1P-201ENST00000434692 4016 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 CYP2C8-212ENST00000623108 1962 ntTSL 2 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 OVAAL-201ENST00000442621 1489 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 CCDC152-201ENST00000361970 3431 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 GPD2-203ENST00000409674 2397 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 SLC3A1-206ENST00000409740 1418 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 ZHX3-217ENST00000560361 4140 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 BMPR1B-201ENST00000264568 1807 ntAPPRIS P1 TSL 2 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 AL929601.4-201ENST00000613011 1341 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 SYTL4-203ENST00000372981 4847 ntTSL 2 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 TTC26-203ENST00000464848 4299 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 OR5T3-202ENST00000313033 969 ntAPPRIS P1 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 RNU4-81P-201ENST00000363561 144 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 SNORD116.1-201ENST00000365628 92 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 COMMD6-204ENST00000377619 594 ntTSL 2 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 MIR152-201ENST00000385212 87 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 FAUP2-201ENST00000394301 401 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 MTCO1P56-201ENST00000401674 224 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 RNU2-17P-201ENST00000410290 190 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 RPS7P9-201ENST00000414704 586 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 PGM5-AS1-202ENST00000420855 572 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 CD33-203ENST00000421133 1023 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 AC008753.1-201ENST00000423096 284 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 HIGD1AP12-201ENST00000427832 281 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 DLEU1-AS1-201ENST00000428276 731 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 OR6R1P-201ENST00000431838 940 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 AL139327.2-202ENST00000437057 400 ntTSL 3 BASIC6.6□□□□□ -1.35
NUP43Q8NFH3 AC019185.3-201ENST00000438805 323 ntBASIC6.6□□□□□ -1.35
NUP43Q8NFH3 OR51P1P-201ENST00000447547 942 ntBASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms