Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC093524.1-201ENST00000564266 1094 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC019322.1-201ENST00000571869 389 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.4□□□□□ -1.38
CCDC50Q8IVM0 DBT-202ENST00000370132 10799 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC50Q8IVM0 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.4□□□□□ -1.39
CCDC50Q8IVM0 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.4□□□□□ -1.39
CCDC50Q8IVM0 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
CCDC50Q8IVM0 AC114876.1-201ENST00000490962 1366 ntBASIC6.4□□□□□ -1.39
CCDC50Q8IVM0 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC50Q8IVM0 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.4□□□□□ -1.39
CCDC50Q8IVM0 AC125336.1-201ENST00000508893 2827 ntBASIC6.4□□□□□ -1.39
CCDC50Q8IVM0 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 RNA5SP77-201ENST00000365394 120 ntBASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 AL157702.1-201ENST00000398764 426 ntBASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 RPS4XP17-201ENST00000479057 754 ntBASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 PMP2-202ENST00000519260 1264 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 AC012368.3-201ENST00000604190 219 ntBASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 AC008555.7-201ENST00000605008 583 ntBASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 AC022001.1-201ENST00000605193 268 ntBASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 RN7SL261P-201ENST00000613441 282 ntBASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 AC211486.4-201ENST00000621495 113 ntBASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
CCDC50Q8IVM0 ADAM24P-201ENST00000398655 2101 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 RYR3-209ENST00000634418 15078 ntAPPRIS ALT2 TSL 5 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AP005435.3-201ENST00000531260 3198 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AL022311.1-201ENST00000623726 19416 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 SNORD1C-201ENST00000363315 78 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 SNORA64.3-201ENST00000365647 134 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 OR51B4-201ENST00000380224 933 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 SNORA5.1-201ENST00000384275 131 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 RN7SKP144-201ENST00000411108 279 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC245291.3-201ENST00000443400 292 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC234771.2-201ENST00000445718 597 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 HIGD1AP16-201ENST00000450986 258 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 RBMY2HP-201ENST00000457961 720 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 IGHV7-34-1-201ENST00000519200 350 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC063977.7-201ENST00000594454 337 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC141002.1-201ENST00000607025 279 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 GAPDHP41-201ENST00000613707 975 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AL122023.1-201ENST00000622847 530 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AL161457.2-202ENST00000629161 743 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AP000550.3-201ENST00000637734 379 ntBASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 C5-201ENST00000223642 5465 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
CCDC50Q8IVM0 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms