Protein–RNA interactions for Protein: Q86YN6

PPARGC1B, Peroxisome proliferator-activated receptor gamma coactivator 1-beta, humanhuman

Known RBP Predictions only

Length 1,023 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1BQ86YN6 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC10.02□□□□□ -0.81
PPARGC1BQ86YN6 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
PPARGC1BQ86YN6 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC10.02□□□□□ -0.81
PPARGC1BQ86YN6 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC10.02□□□□□ -0.81
PPARGC1BQ86YN6 AC068769.1-201ENST00000474767 2426 ntBASIC10.02□□□□□ -0.81
PPARGC1BQ86YN6 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
PPARGC1BQ86YN6 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 ABCA11P-202ENST00000504019 2110 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 FAM13C-219ENST00000621119 3400 ntAPPRIS ALT2 TSL 5 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 RPL11P4-201ENST00000332269 436 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 MIR191-201ENST00000384873 92 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 CCL20-202ENST00000409189 839 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 RPL23AP85-201ENST00000421838 433 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 MTND4P32-201ENST00000437189 1237 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC009237.1-201ENST00000442127 744 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 RPL29P23-201ENST00000486188 442 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 UBTFL10-201ENST00000528532 562 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 NPIPA8-202ENST00000541810 1131 ntAPPRIS P1 TSL 5 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 NPIPA3-203ENST00000552140 1053 ntTSL 5 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 NPIPA2-203ENST00000553201 1053 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 MIR3157-201ENST00000578688 85 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC005776.1-201ENST00000603164 290 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AL022161.1-201ENST00000604390 213 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC097467.4-201ENST00000605504 141 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 MIR6085-201ENST00000618314 110 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC098679.4-201ENST00000624241 654 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AC004808.1-201ENST00000627671 721 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 TMEM30CP-203ENST00000637814 1035 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 USP40-202ENST00000409945 1946 ntTSL 2 BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 USP9YP3-201ENST00000434481 1766 ntBASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
PPARGC1BQ86YN6 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC217777.1-201ENST00000570034 1471 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC020658.2-201ENST00000559030 4020 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 TINAG-203ENST00000370869 782 ntTSL 3 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 YWHAZP4-201ENST00000392459 708 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AL157702.1-201ENST00000398764 426 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AL451046.1-201ENST00000406097 534 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 RNA5SP251-201ENST00000410614 137 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC069282.1-201ENST00000411911 526 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 MORF4L1P6-201ENST00000418771 268 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 BX119904.4-201ENST00000424402 301 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC097721.1-201ENST00000427150 1253 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 BMP6P1-201ENST00000431230 679 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC027338.1-201ENST00000514840 825 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 RNA5SP318-201ENST00000516352 92 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC087894.1-201ENST00000538359 518 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC106785.3-201ENST00000564064 847 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC005156.1-201ENST00000613371 573 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC092140.2-201ENST00000618027 521 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 MLH3-202ENST00000380968 7819 ntTSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AL133243.2-201ENST00000610331 1621 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 AC096656.1-201ENST00000623826 1364 ntBASIC10□□□□□ -0.81
PPARGC1BQ86YN6 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 CASC15-201ENST00000444265 1497 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 ZNF233-205ENST00000592581 2938 ntTSL 2 BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 GPR174-201ENST00000276077 1258 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 RNU6-650P-201ENST00000365658 111 ntBASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 TOMM6-202ENST00000398884 637 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 AL023284.3-201ENST00000407767 334 ntBASIC9.99□□□□□ -0.81
PPARGC1BQ86YN6 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 71.8 ms