Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 LINC01141-204ENST00000635564 1008 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 AC100810.3-201ENST00000633189 2240 ntBASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 AC007731.1-202ENST00000610338 1870 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 AC093775.1-201ENST00000624154 1868 ntBASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
KCNIP4Q6PIL6 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 WASHC4-202ENST00000332180 5812 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC027228.2-201ENST00000567141 2154 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC006484.1-201ENST00000435086 1884 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 OR52A1-201ENST00000328942 939 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 RNU1-146P-201ENST00000364015 165 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 RN7SKP128-201ENST00000364270 303 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 U3.10-201ENST00000364459 214 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 RNA5SP427-201ENST00000365323 119 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC104297.1-201ENST00000393779 870 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC023469.1-201ENST00000409243 469 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC096570.1-201ENST00000419013 569 ntTSL 4 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC018804.1-201ENST00000430381 618 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 PUDPP2-201ENST00000431423 643 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 NIP7P1-201ENST00000433227 512 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 ST13P2-201ENST00000438916 1109 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 OR52U1P-201ENST00000439752 923 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC108463.2-201ENST00000451230 412 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AL355472.1-201ENST00000451795 575 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 FCRL2-205ENST00000469986 902 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC022415.1-202ENST00000486612 523 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC022206.1-201ENST00000495947 347 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 PSMA2P2-201ENST00000504319 686 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AP002026.1-204ENST00000506454 749 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC091849.1-201ENST00000509920 121 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC090958.1-201ENST00000511122 351 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC009879.1-201ENST00000520029 839 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC138832.1-201ENST00000522871 556 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 ARL6IP1P3-201ENST00000524544 560 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AP002336.1-201ENST00000531426 422 ntTSL 2 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 FAM106CP-201ENST00000582212 507 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC090774.2-201ENST00000584708 322 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AL049829.3-202ENST00000604278 711 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC005070.2-201ENST00000604391 260 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 GBA3-207ENST00000613293 1233 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC107905.1-201ENST00000616204 426 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC005618.4-201ENST00000625053 554 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 SNORA16A-202ENST00000628458 135 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 LINC01002-204ENST00000631644 473 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC140479.4-205ENST00000636339 820 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 OR9K1P-202ENST00000641111 3217 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 LYARP1-201ENST00000436977 1501 ntBASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
KCNIP4Q6PIL6 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 EEF1A1P30-201ENST00000429708 1315 ntBASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 LIMA1-202ENST00000394943 3669 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 VPS35P1-201ENST00000563400 1518 ntBASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 MT-RNR1-201ENST00000389680 954 ntBASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC4.79□□□□□ -1.64
KCNIP4Q6PIL6 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms