Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC138517.1-201ENST00000515724 568 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 RNU6-889P-201ENST00000517189 103 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 AC130364.2-201ENST00000528639 604 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 SAA3P-201ENST00000533267 365 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 AC089984.3-201ENST00000552838 363 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 FCF1-203ENST00000553615 954 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 IQCK-206ENST00000564186 882 ntAPPRIS ALT2 TSL 2 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 EEF1B2P1-201ENST00000567221 672 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 EIF1P4-201ENST00000572664 335 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 AL592221.1-201ENST00000605266 382 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 AL445649.1-201ENST00000615941 691 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF43Q68DV7 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 AL356121.2-201ENST00000624715 780 ntBASIC7.51□□□□□ -1.21
RNF43Q68DV7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 AL117339.5-201ENST00000640275 3955 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 SLC16A4-202ENST00000369781 2082 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF43Q68DV7 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 MMACHC-203ENST00000616135 1510 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 GDNF-202ENST00000344622 3655 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
RNF43Q68DV7 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 CCP110-202ENST00000396208 5151 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
RNF43Q68DV7 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC7.51□□□□□ -1.21
RNF43Q68DV7 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 FOXP1-212ENST00000491238 2250 ntTSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 CD160-205ENST00000616463 3388 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 MAPK10-383ENST00000642032 3390 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 MEPE-204ENST00000497649 2226 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 RNASE13-201ENST00000382951 1607 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 SNORD113-6-201ENST00000363345 75 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 RNU6-207P-201ENST00000384137 107 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 RPL24P7-201ENST00000399435 453 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC073900.1-201ENST00000429766 776 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 MTND3P23-201ENST00000431980 347 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 GTF2IP14-201ENST00000441415 586 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AL161626.1-201ENST00000441480 490 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AL772337.3-201ENST00000447524 452 ntTSL 3 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC236972.4-201ENST00000458091 963 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 RN7SL251P-201ENST00000464175 297 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 RPS14P7-201ENST00000473701 448 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 RPS7P11-201ENST00000484240 586 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 OR9N1P-201ENST00000491296 333 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 RNU6-759P-201ENST00000516740 103 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 CRYAB-207ENST00000527950 887 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 LYZ-202ENST00000548839 558 ntTSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 NDUFA3P4-201ENST00000560814 250 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 LINC00469-203ENST00000579749 583 ntTSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC006441.1-201ENST00000581083 437 ntTSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 RN7SL66P-201ENST00000582099 264 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC022069.1-201ENST00000582910 658 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC011591.1-201ENST00000591379 518 ntTSL 2 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 VN1R92P-201ENST00000598511 928 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AL606834.2-201ENST00000602954 668 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 COX6CP16-201ENST00000603667 216 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AL163642.2-201ENST00000604722 1019 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC100767.2-201ENST00000604840 693 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AL109618.2-201ENST00000605527 211 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AL021707.7-201ENST00000607991 416 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 HNF4A-AS1-202ENST00000609152 413 ntTSL 3 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC027271.1-201ENST00000610270 610 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC016542.3-201ENST00000623520 619 ntBASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 UGP2-232ENST00000640075 567 ntTSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
RNF43Q68DV7 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 PPHLN1-207ENST00000432191 3377 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 NFX1-203ENST00000379540 4604 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
RNF43Q68DV7 KIF1B-203ENST00000377083 5885 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms