Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC096708.4-201ENST00000620563 552 ntBASIC6.22□□□□□ -1.41
CDH4P55283 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH4P55283 RBPJP7-201ENST00000442803 1447 ntBASIC6.22□□□□□ -1.41
CDH4P55283 RBPJP5-201ENST00000449433 1447 ntBASIC6.22□□□□□ -1.41
CDH4P55283 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH4P55283 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH4P55283 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
CDH4P55283 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.22□□□□□ -1.41
CDH4P55283 ELOVL5-203ENST00000370918 3081 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH4P55283 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.22□□□□□ -1.41
CDH4P55283 AC016583.1-201ENST00000624221 2431 ntBASIC6.21□□□□□ -1.41
CDH4P55283 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CDH4P55283 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.21□□□□□ -1.41
CDH4P55283 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6.21□□□□□ -1.41
CDH4P55283 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDH4P55283 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.21□□□□□ -1.41
CDH4P55283 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH4P55283 PSG10P-201ENST00000501199 1500 ntBASIC6.21□□□□□ -1.42
CDH4P55283 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH4P55283 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH4P55283 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDH4P55283 AC090616.2-201ENST00000358484 431 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH4P55283 RNA5SP514-201ENST00000363717 111 ntBASIC6.21□□□□□ -1.42
CDH4P55283 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH4P55283 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDH4P55283 AC022173.1-201ENST00000418554 577 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH4P55283 OSBPL10-AS1-202ENST00000418728 458 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH4P55283 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH4P55283 PCNPP2-201ENST00000441651 455 ntBASIC6.21□□□□□ -1.42
CDH4P55283 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH4P55283 AC117394.1-201ENST00000477323 567 ntBASIC6.21□□□□□ -1.42
CDH4P55283 PPP1R11P1-201ENST00000486095 376 ntBASIC6.21□□□□□ -1.42
CDH4P55283 RPL23AP40-201ENST00000487630 390 ntBASIC6.21□□□□□ -1.42
CDH4P55283 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH4P55283 OR5D2P-201ENST00000524390 911 ntBASIC6.21□□□□□ -1.42
CDH4P55283 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH4P55283 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
CDH4P55283 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH4P55283 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH4P55283 LINC00556-201ENST00000569603 412 ntBASIC6.21□□□□□ -1.42
CDH4P55283 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.21□□□□□ -1.42
CDH4P55283 AC005244.1-201ENST00000582566 339 ntBASIC6.21□□□□□ -1.42
CDH4P55283 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC6.21□□□□□ -1.42
CDH4P55283 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH4P55283 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CDH4P55283 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH4P55283 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.21□□□□□ -1.42
CDH4P55283 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH4P55283 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH4P55283 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
CDH4P55283 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH4P55283 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH4P55283 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
CDH4P55283 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC6.21□□□□□ -1.42
CDH4P55283 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC6.21□□□□□ -1.42
CDH4P55283 ST7-204ENST00000393444 2113 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 CDH18-210ENST00000511273 2318 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH4P55283 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
CDH4P55283 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH4P55283 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.2□□□□□ -1.42
CDH4P55283 OR10R3P-201ENST00000361688 942 ntBASIC6.2□□□□□ -1.42
CDH4P55283 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
CDH4P55283 RN7SKP166-201ENST00000410812 305 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AL136988.2-201ENST00000440729 861 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH4P55283 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 HMGN1P2-201ENST00000445197 310 ntBASIC6.2□□□□□ -1.42
CDH4P55283 CST12P-201ENST00000457644 362 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AC128716.1-201ENST00000475129 166 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AC025458.1-201ENST00000506046 166 ntBASIC6.2□□□□□ -1.42
CDH4P55283 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH4P55283 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH4P55283 AC110056.1-201ENST00000525759 911 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH4P55283 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH4P55283 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.2□□□□□ -1.42
CDH4P55283 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH4P55283 AL138895.2-201ENST00000603019 178 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AC108673.3-201ENST00000609183 335 ntBASIC6.2□□□□□ -1.42
CDH4P55283 MIR6778-201ENST00000617912 73 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AL136228.1-201ENST00000622221 319 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AC129778.1-202ENST00000623812 261 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH4P55283 AL591379.1-207ENST00000635982 261 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.2□□□□□ -1.42
CDH4P55283 MIR1910-201ENST00000636955 80 ntBASIC6.2□□□□□ -1.42
CDH4P55283 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.2□□□□□ -1.42
CDH4P55283 AC079753.1-201ENST00000623243 3868 ntBASIC6.2□□□□□ -1.42
CDH4P55283 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH4P55283 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH4P55283 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.2□□□□□ -1.42
CDH4P55283 SAMMSON-210ENST00000641260 1308 ntBASIC6.2□□□□□ -1.42
CDH4P55283 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
CDH4P55283 BRAFP1-201ENST00000445336 2703 ntBASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 842.8 ms