Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 RFC1-201ENST00000349703 4859 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
PDX1P52945 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 AC079355.1-201ENST00000421770 223 ntBASIC6.01□□□□□ -1.45
PDX1P52945 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC6.01□□□□□ -1.45
PDX1P52945 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC6.01□□□□□ -1.45
PDX1P52945 AL356309.2-201ENST00000454034 719 ntTSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 VPS25P1-201ENST00000455691 508 ntBASIC6.01□□□□□ -1.45
PDX1P52945 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC6.01□□□□□ -1.45
PDX1P52945 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.01□□□□□ -1.45
PDX1P52945 RNA5SP438-201ENST00000516561 112 ntBASIC6.01□□□□□ -1.45
PDX1P52945 RNA5SP434-201ENST00000516647 121 ntBASIC6.01□□□□□ -1.45
PDX1P52945 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.01□□□□□ -1.45
PDX1P52945 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC6.01□□□□□ -1.45
PDX1P52945 CETN3-206ENST00000522864 738 ntTSL 3 BASIC6.01□□□□□ -1.45
PDX1P52945 AL121579.2-201ENST00000555466 590 ntBASIC6.01□□□□□ -1.45
PDX1P52945 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC6.01□□□□□ -1.45
PDX1P52945 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 AC108673.3-201ENST00000609183 335 ntBASIC6.01□□□□□ -1.45
PDX1P52945 AC109309.2-201ENST00000612597 332 ntBASIC6.01□□□□□ -1.45
PDX1P52945 TCL6_3.1-201ENST00000619064 137 ntBASIC6.01□□□□□ -1.45
PDX1P52945 AP001885.1-201ENST00000621658 558 ntBASIC6.01□□□□□ -1.45
PDX1P52945 LINC02246-206ENST00000630211 712 ntTSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 AL132640.3-201ENST00000630473 177 ntBASIC6.01□□□□□ -1.45
PDX1P52945 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 RFC1-217ENST00000639695 867 ntTSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 AC009779.8-201ENST00000641684 4384 ntBASIC6.01□□□□□ -1.45
PDX1P52945 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
PDX1P52945 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
PDX1P52945 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.01□□□□□ -1.45
PDX1P52945 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.01□□□□□ -1.45
PDX1P52945 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
PDX1P52945 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6□□□□□ -1.45
PDX1P52945 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6□□□□□ -1.45
PDX1P52945 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC6□□□□□ -1.45
PDX1P52945 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC6□□□□□ -1.45
PDX1P52945 RPL12P16-201ENST00000431098 498 ntBASIC6□□□□□ -1.45
PDX1P52945 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6□□□□□ -1.45
PDX1P52945 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6□□□□□ -1.45
PDX1P52945 CFL1P4-201ENST00000451536 498 ntBASIC6□□□□□ -1.45
PDX1P52945 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC6□□□□□ -1.45
PDX1P52945 RN7SL273P-201ENST00000481561 299 ntBASIC6□□□□□ -1.45
PDX1P52945 RN7SL214P-201ENST00000487317 265 ntBASIC6□□□□□ -1.45
PDX1P52945 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC6□□□□□ -1.45
PDX1P52945 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6□□□□□ -1.45
PDX1P52945 AC114781.3-201ENST00000512083 142 ntBASIC6□□□□□ -1.45
PDX1P52945 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6□□□□□ -1.45
PDX1P52945 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6□□□□□ -1.45
PDX1P52945 AC027544.3-201ENST00000535082 757 ntBASIC6□□□□□ -1.45
PDX1P52945 AP001858.2-201ENST00000536213 601 ntBASIC6□□□□□ -1.45
PDX1P52945 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6□□□□□ -1.45
PDX1P52945 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6□□□□□ -1.45
PDX1P52945 AC020978.7-201ENST00000575953 1187 ntBASIC6□□□□□ -1.45
PDX1P52945 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6□□□□□ -1.45
PDX1P52945 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6□□□□□ -1.45
PDX1P52945 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6□□□□□ -1.45
PDX1P52945 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6□□□□□ -1.45
PDX1P52945 AC022106.1-201ENST00000612834 766 ntBASIC6□□□□□ -1.45
PDX1P52945 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6□□□□□ -1.45
PDX1P52945 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC6□□□□□ -1.45
PDX1P52945 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC6□□□□□ -1.45
PDX1P52945 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PDX1P52945 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
PDX1P52945 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6□□□□□ -1.45
PDX1P52945 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
PDX1P52945 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6□□□□□ -1.45
PDX1P52945 AL359976.1-201ENST00000418655 3528 ntBASIC6□□□□□ -1.45
PDX1P52945 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 AC105235.1-201ENST00000623208 1816 ntBASIC5.99□□□□□ -1.45
PDX1P52945 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
PDX1P52945 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.99□□□□□ -1.45
PDX1P52945 LINC02119-201ENST00000508853 2573 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
PDX1P52945 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms