Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
SMARCA4P51532 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 ARNT2-207ENST00000533983 6690 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
SMARCA4P51532 DNA2-208ENST00000551118 3468 ntTSL 5 BASIC10.35□□□□□ -0.75
SMARCA4P51532 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC10.35□□□□□ -0.75
SMARCA4P51532 HLF-210ENST00000575345 3589 ntTSL 2 BASIC10.35□□□□□ -0.75
SMARCA4P51532 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
SMARCA4P51532 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
SMARCA4P51532 ARHGAP19-202ENST00000358531 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 RPL23P2-201ENST00000320371 421 ntBASIC10.35□□□□□ -0.75
SMARCA4P51532 AL022319.1-201ENST00000458183 1167 ntBASIC10.35□□□□□ -0.75
SMARCA4P51532 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 RN7SKP288-201ENST00000516227 268 ntBASIC10.35□□□□□ -0.75
SMARCA4P51532 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC10.35□□□□□ -0.75
SMARCA4P51532 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC10.35□□□□□ -0.75
SMARCA4P51532 AC087763.1-201ENST00000603391 286 ntBASIC10.35□□□□□ -0.75
SMARCA4P51532 TRIM2-201ENST00000338700 6735 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 LGSN-202ENST00000370658 5213 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 IL2RA-203ENST00000379959 3176 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 CYP3A5-202ENST00000339843 3320 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 MAPK10-208ENST00000395169 4049 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC10.35□□□□□ -0.75
SMARCA4P51532 RNF146-215ENST00000616343 2077 ntAPPRIS ALT1 TSL 5 BASIC10.35□□□□□ -0.75
SMARCA4P51532 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
SMARCA4P51532 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC10.34□□□□□ -0.75
SMARCA4P51532 SHPRH-203ENST00000367505 7201 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
SMARCA4P51532 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SMARCA4P51532 AL391261.1-201ENST00000555712 1479 ntBASIC10.34□□□□□ -0.75
SMARCA4P51532 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMARCA4P51532 RNA5SP319-201ENST00000362768 119 ntBASIC10.34□□□□□ -0.75
SMARCA4P51532 AC092801.1-201ENST00000443763 581 ntTSL 3 BASIC10.34□□□□□ -0.75
SMARCA4P51532 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC10.34□□□□□ -0.75
SMARCA4P51532 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
SMARCA4P51532 AC117386.2-203ENST00000489690 557 ntTSL 3 BASIC10.34□□□□□ -0.75
SMARCA4P51532 AC147055.3-201ENST00000510547 851 ntBASIC10.34□□□□□ -0.75
SMARCA4P51532 AC073581.1-201ENST00000519036 575 ntBASIC10.34□□□□□ -0.75
SMARCA4P51532 AC126615.2-201ENST00000553003 515 ntBASIC10.34□□□□□ -0.75
SMARCA4P51532 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC10.34□□□□□ -0.75
SMARCA4P51532 AC133644.2-201ENST00000608142 540 ntBASIC10.34□□□□□ -0.75
SMARCA4P51532 AL445528.2-201ENST00000620582 470 ntBASIC10.34□□□□□ -0.75
SMARCA4P51532 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMARCA4P51532 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMARCA4P51532 ERG-205ENST00000398910 4954 ntTSL 5 BASIC10.34□□□□□ -0.75
SMARCA4P51532 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
SMARCA4P51532 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC10.34□□□□□ -0.75
SMARCA4P51532 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
SMARCA4P51532 AC130304.1-201ENST00000622942 2385 ntBASIC10.34□□□□□ -0.75
SMARCA4P51532 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC10.34□□□□□ -0.75
SMARCA4P51532 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC10.33□□□□□ -0.76
SMARCA4P51532 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SMARCA4P51532 MIR765-201ENST00000390226 114 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 YWHABP1-201ENST00000445359 727 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC10.33□□□□□ -0.76
SMARCA4P51532 NMNAT1P5-201ENST00000559657 841 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC10.33□□□□□ -0.76
SMARCA4P51532 AC004890.3-201ENST00000605566 1095 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 AC132068.1-201ENST00000623805 459 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 AC009166.2-201ENST00000624410 2833 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC10.33□□□□□ -0.76
SMARCA4P51532 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC10.33□□□□□ -0.76
SMARCA4P51532 IMMTP1-201ENST00000435590 2219 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SMARCA4P51532 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SMARCA4P51532 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SMARCA4P51532 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SMARCA4P51532 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SMARCA4P51532 TMEM269-204ENST00000637012 3354 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
SMARCA4P51532 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SMARCA4P51532 RASGEF1B-203ENST00000436139 6323 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
SMARCA4P51532 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC10.33□□□□□ -0.76
SMARCA4P51532 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
SMARCA4P51532 ZFX-204ENST00000379188 7513 ntTSL 5 BASIC10.33□□□□□ -0.76
SMARCA4P51532 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC10.33□□□□□ -0.76
SMARCA4P51532 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
SMARCA4P51532 RPS6P23-201ENST00000413224 722 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 NIFKP3-201ENST00000417799 865 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC10.33□□□□□ -0.76
SMARCA4P51532 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC10.33□□□□□ -0.76
SMARCA4P51532 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC10.33□□□□□ -0.76
SMARCA4P51532 RBM22P1-201ENST00000578589 1214 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 AC025574.2-201ENST00000615621 514 ntBASIC10.33□□□□□ -0.76
SMARCA4P51532 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC10.33□□□□□ -0.76
SMARCA4P51532 AC112255.1-201ENST00000624070 2493 ntBASIC10.32□□□□□ -0.76
SMARCA4P51532 C20orf194-201ENST00000252032 6869 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
SMARCA4P51532 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SMARCA4P51532 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SMARCA4P51532 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC10.32□□□□□ -0.76
SMARCA4P51532 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SMARCA4P51532 CDKAL1-204ENST00000613575 1673 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
SMARCA4P51532 HDAC9-214ENST00000441542 3210 ntAPPRIS P4 TSL 1 (best) BASIC10.32□□□□□ -0.76
SMARCA4P51532 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
SMARCA4P51532 NRCAM-205ENST00000413765 6406 ntTSL 2 BASIC10.32□□□□□ -0.76
SMARCA4P51532 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC10.32□□□□□ -0.76
SMARCA4P51532 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC10.32□□□□□ -0.76
SMARCA4P51532 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
SMARCA4P51532 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SMARCA4P51532 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
SMARCA4P51532 LINC01918-202ENST00000438148 415 ntTSL 3 BASIC10.32□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 75.3 ms