Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 RNA5SP375-201ENST00000362975 119 ntBASIC6.05□□□□□ -1.44
RPA3P35244 RNA5SP346-201ENST00000363541 121 ntBASIC6.05□□□□□ -1.44
RPA3P35244 RN7SKP128-201ENST00000364270 303 ntBASIC6.05□□□□□ -1.44
RPA3P35244 MIR188-201ENST00000385034 86 ntBASIC6.05□□□□□ -1.44
RPA3P35244 AL139805.1-201ENST00000407837 289 ntBASIC6.05□□□□□ -1.44
RPA3P35244 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPA3P35244 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPA3P35244 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC6.05□□□□□ -1.44
RPA3P35244 PPIAP10-201ENST00000438675 458 ntBASIC6.05□□□□□ -1.44
RPA3P35244 RPSAP40-201ENST00000442343 891 ntBASIC6.05□□□□□ -1.44
RPA3P35244 AL512593.1-201ENST00000444758 779 ntBASIC6.05□□□□□ -1.44
RPA3P35244 Z83838.1-202ENST00000456225 839 ntBASIC6.05□□□□□ -1.44
RPA3P35244 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC6.05□□□□□ -1.44
RPA3P35244 CCDC11P1-201ENST00000503137 1162 ntBASIC6.05□□□□□ -1.44
RPA3P35244 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.05□□□□□ -1.44
RPA3P35244 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC6.05□□□□□ -1.44
RPA3P35244 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.05□□□□□ -1.44
RPA3P35244 RNA5SP441-201ENST00000516809 88 ntBASIC6.05□□□□□ -1.44
RPA3P35244 Y_RNA.710-201ENST00000516975 110 ntBASIC6.05□□□□□ -1.44
RPA3P35244 AC087360.1-201ENST00000518788 616 ntBASIC6.05□□□□□ -1.44
RPA3P35244 AC084880.3-201ENST00000535921 541 ntTSL 4 BASIC6.05□□□□□ -1.44
RPA3P35244 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.05□□□□□ -1.44
RPA3P35244 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC6.05□□□□□ -1.44
RPA3P35244 NPM1P5-201ENST00000557228 838 ntBASIC6.05□□□□□ -1.44
RPA3P35244 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC6.05□□□□□ -1.44
RPA3P35244 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
RPA3P35244 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.05□□□□□ -1.44
RPA3P35244 AC060780.2-201ENST00000589047 198 ntBASIC6.05□□□□□ -1.44
RPA3P35244 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.05□□□□□ -1.44
RPA3P35244 AC022106.1-201ENST00000612834 766 ntBASIC6.05□□□□□ -1.44
RPA3P35244 MIR6889-201ENST00000613185 59 ntBASIC6.05□□□□□ -1.44
RPA3P35244 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.05□□□□□ -1.44
RPA3P35244 AC018765.1-201ENST00000623357 3446 ntBASIC6.05□□□□□ -1.44
RPA3P35244 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
RPA3P35244 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.05□□□□□ -1.44
RPA3P35244 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPA3P35244 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
RPA3P35244 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
RPA3P35244 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPA3P35244 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPA3P35244 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
RPA3P35244 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPA3P35244 AP000432.2-201ENST00000624164 2048 ntBASIC6.04□□□□□ -1.44
RPA3P35244 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPA3P35244 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC6.04□□□□□ -1.44
RPA3P35244 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 AC232271.1-201ENST00000602455 2715 ntBASIC6.04□□□□□ -1.44
RPA3P35244 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RPA3P35244 RNA5SP453-201ENST00000362503 119 ntBASIC6.04□□□□□ -1.44
RPA3P35244 RN7SKP166-201ENST00000410812 305 ntBASIC6.04□□□□□ -1.44
RPA3P35244 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 AC099782.1-201ENST00000425889 474 ntBASIC6.04□□□□□ -1.44
RPA3P35244 YRDCP3-201ENST00000456507 480 ntBASIC6.04□□□□□ -1.44
RPA3P35244 ACA64.4-201ENST00000459070 127 ntBASIC6.04□□□□□ -1.44
RPA3P35244 AK6-203ENST00000502819 743 ntTSL 5 BASIC6.04□□□□□ -1.44
RPA3P35244 AC108103.1-201ENST00000511286 446 ntBASIC6.04□□□□□ -1.44
RPA3P35244 RN7SKP288-201ENST00000516227 268 ntBASIC6.04□□□□□ -1.44
RPA3P35244 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.04□□□□□ -1.44
RPA3P35244 NATP-201ENST00000523491 878 ntBASIC6.04□□□□□ -1.44
RPA3P35244 GOLT1B-205ENST00000540141 1055 ntAPPRIS ALT1 TSL 4 BASIC6.04□□□□□ -1.44
RPA3P35244 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.04□□□□□ -1.44
RPA3P35244 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC6.04□□□□□ -1.44
RPA3P35244 BMS1P16-201ENST00000556075 1147 ntBASIC6.04□□□□□ -1.44
RPA3P35244 AL078601.3-201ENST00000573303 535 ntBASIC6.04□□□□□ -1.44
RPA3P35244 AC008555.7-201ENST00000605008 583 ntBASIC6.04□□□□□ -1.44
RPA3P35244 AL135999.3-201ENST00000610501 812 ntBASIC6.04□□□□□ -1.44
RPA3P35244 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.04□□□□□ -1.44
RPA3P35244 SNX18P12-201ENST00000624821 759 ntBASIC6.04□□□□□ -1.44
RPA3P35244 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 SMG1-201ENST00000330588 1588 ntTSL 5 BASIC6.04□□□□□ -1.44
RPA3P35244 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.04□□□□□ -1.44
RPA3P35244 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 AL161901.1-201ENST00000624954 3425 ntBASIC6.04□□□□□ -1.44
RPA3P35244 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 FBXW12-204ENST00000445170 1379 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 SAMM50P1-201ENST00000455403 1399 ntBASIC6.04□□□□□ -1.44
RPA3P35244 PPBPP2-201ENST00000513150 1362 ntBASIC6.04□□□□□ -1.44
RPA3P35244 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
RPA3P35244 AC090181.3-201ENST00000624777 1514 ntBASIC6.04□□□□□ -1.44
RPA3P35244 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC6.04□□□□□ -1.44
RPA3P35244 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
RPA3P35244 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
RPA3P35244 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPA3P35244 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
RPA3P35244 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPA3P35244 AC109446.4-201ENST00000623235 2755 ntBASIC6.03□□□□□ -1.44
RPA3P35244 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC6.03□□□□□ -1.44
RPA3P35244 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC6.03□□□□□ -1.44
RPA3P35244 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPA3P35244 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC6.03□□□□□ -1.44
RPA3P35244 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
RPA3P35244 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
RPA3P35244 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 86.3 ms