Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.56□□□□□ -1.52
SHC1P29353 RN7SKP35-201ENST00000517210 151 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.56□□□□□ -1.52
SHC1P29353 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC5.56□□□□□ -1.52
SHC1P29353 AC021269.1-201ENST00000526860 705 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AC024405.1-201ENST00000532521 1042 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AC084121.1-201ENST00000533882 835 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC5.56□□□□□ -1.52
SHC1P29353 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHC1P29353 LINC01908-201ENST00000583148 555 ntTSL 4 BASIC5.56□□□□□ -1.52
SHC1P29353 CBLN2-208ENST00000584764 543 ntTSL 4 BASIC5.56□□□□□ -1.52
SHC1P29353 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.56□□□□□ -1.52
SHC1P29353 AC027334.1-201ENST00000603257 310 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AC073333.2-201ENST00000603589 769 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AP001823.1-201ENST00000604056 1003 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AC008555.7-201ENST00000605008 583 ntBASIC5.56□□□□□ -1.52
SHC1P29353 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.56□□□□□ -1.52
SHC1P29353 AL512652.1-201ENST00000619006 500 ntBASIC5.56□□□□□ -1.52
SHC1P29353 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC5.56□□□□□ -1.52
SHC1P29353 TEX41-271ENST00000628213 993 ntTSL 5 BASIC5.56□□□□□ -1.52
SHC1P29353 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.56□□□□□ -1.52
SHC1P29353 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.56□□□□□ -1.52
SHC1P29353 AC011416.1-201ENST00000514947 1732 ntBASIC5.56□□□□□ -1.52
SHC1P29353 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHC1P29353 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHC1P29353 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
SHC1P29353 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
SHC1P29353 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 AC024651.2-201ENST00000562480 2098 ntBASIC5.55□□□□□ -1.52
SHC1P29353 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC5.55□□□□□ -1.52
SHC1P29353 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHC1P29353 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.55□□□□□ -1.52
SHC1P29353 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.55□□□□□ -1.52
SHC1P29353 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.55□□□□□ -1.52
SHC1P29353 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.55□□□□□ -1.52
SHC1P29353 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
SHC1P29353 AC099535.1-201ENST00000408928 371 ntBASIC5.55□□□□□ -1.52
SHC1P29353 RPS20P25-201ENST00000412447 352 ntBASIC5.55□□□□□ -1.52
SHC1P29353 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.55□□□□□ -1.52
SHC1P29353 AC015977.1-201ENST00000418887 292 ntBASIC5.55□□□□□ -1.52
SHC1P29353 OR3D1P-201ENST00000438288 955 ntBASIC5.55□□□□□ -1.52
SHC1P29353 KRTAP2-5P-201ENST00000446109 396 ntBASIC5.55□□□□□ -1.52
SHC1P29353 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 HMGB1P7-201ENST00000450921 612 ntBASIC5.55□□□□□ -1.52
SHC1P29353 PPIAP7-201ENST00000454070 489 ntBASIC5.55□□□□□ -1.52
SHC1P29353 SEPT14P1-201ENST00000458703 648 ntBASIC5.55□□□□□ -1.52
SHC1P29353 AC090058.1-201ENST00000498788 435 ntBASIC5.55□□□□□ -1.52
SHC1P29353 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC5.55□□□□□ -1.52
SHC1P29353 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC5.55□□□□□ -1.52
SHC1P29353 RNA5SP434-201ENST00000516647 121 ntBASIC5.55□□□□□ -1.52
SHC1P29353 AC008429.4-201ENST00000521201 182 ntBASIC5.55□□□□□ -1.52
SHC1P29353 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC5.55□□□□□ -1.52
SHC1P29353 AP000620.1-201ENST00000527147 504 ntBASIC5.55□□□□□ -1.52
SHC1P29353 AP000873.2-207ENST00000529607 452 ntTSL 3 BASIC5.55□□□□□ -1.52
SHC1P29353 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.55□□□□□ -1.52
SHC1P29353 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.55□□□□□ -1.52
SHC1P29353 AC007346.1-201ENST00000569208 867 ntBASIC5.55□□□□□ -1.52
SHC1P29353 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC5.55□□□□□ -1.52
SHC1P29353 AL589935.1-201ENST00000602418 488 ntTSL 4 BASIC5.55□□□□□ -1.52
SHC1P29353 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.55□□□□□ -1.52
SHC1P29353 AL591926.1-201ENST00000620542 217 ntBASIC5.55□□□□□ -1.52
SHC1P29353 AC003992.1-201ENST00000635364 557 ntBASIC5.55□□□□□ -1.52
SHC1P29353 CASC19-274ENST00000642018 970 ntBASIC5.55□□□□□ -1.52
SHC1P29353 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.55□□□□□ -1.52
SHC1P29353 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 AP002512.4-202ENST00000641599 4530 ntBASIC5.55□□□□□ -1.52
SHC1P29353 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 MTTP-203ENST00000457717 4092 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
SHC1P29353 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 AC087516.1-201ENST00000561236 2428 ntBASIC5.55□□□□□ -1.52
SHC1P29353 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC5.55□□□□□ -1.52
SHC1P29353 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
SHC1P29353 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
SHC1P29353 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHC1P29353 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHC1P29353 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
SHC1P29353 AC119674.1-202ENST00000641333 1860 ntBASIC5.54□□□□□ -1.52
SHC1P29353 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHC1P29353 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
SHC1P29353 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
SHC1P29353 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
SHC1P29353 RNA5SP375-201ENST00000362975 119 ntBASIC5.54□□□□□ -1.52
SHC1P29353 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.54□□□□□ -1.52
SHC1P29353 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.54□□□□□ -1.52
SHC1P29353 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.54□□□□□ -1.52
SHC1P29353 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.54□□□□□ -1.52
SHC1P29353 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
SHC1P29353 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC5.54□□□□□ -1.52
SHC1P29353 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.54□□□□□ -1.52
SHC1P29353 RPL5P7-201ENST00000444235 813 ntBASIC5.54□□□□□ -1.52
SHC1P29353 AL512593.1-201ENST00000444758 779 ntBASIC5.54□□□□□ -1.52
SHC1P29353 AC093166.3-201ENST00000448785 303 ntBASIC5.54□□□□□ -1.52
SHC1P29353 AC112187.1-201ENST00000455837 479 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms