Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 CRB1-202ENST00000367399 3885 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 SLC14A1-221ENST00000619403 3823 ntTSL 5 BASIC6.12□□□□□ -1.43
CD40P25942 TNPO1-204ENST00000506351 3028 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
CD40P25942 NOX1-202ENST00000372960 2418 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 TBC1D32-201ENST00000275159 4431 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 INTS2-201ENST00000251334 4255 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CD40P25942 ECT2-201ENST00000232458 4087 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 MORF4L2-206ENST00000433176 1965 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
CD40P25942 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 MEIS1-202ENST00000398506 3530 ntTSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 BRDT-202ENST00000362005 3409 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 MRRF-208ENST00000394315 1501 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 ARF4-209ENST00000496292 1467 ntTSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 AL359263.1-201ENST00000441188 2796 ntBASIC6.11□□□□□ -1.43
CD40P25942 SOX6-208ENST00000527619 2699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 RNU6-532P-201ENST00000384318 107 ntBASIC6.11□□□□□ -1.43
CD40P25942 RPS27AP11-201ENST00000402798 447 ntBASIC6.11□□□□□ -1.43
CD40P25942 HNRNPDP2-201ENST00000406475 478 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 TRGV6-201ENST00000417928 299 ntBASIC6.11□□□□□ -1.43
CD40P25942 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC6.11□□□□□ -1.43
CD40P25942 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.11□□□□□ -1.43
CD40P25942 PTP4A1P5-201ENST00000420305 455 ntBASIC6.11□□□□□ -1.43
CD40P25942 USP9YP26-201ENST00000421008 661 ntBASIC6.11□□□□□ -1.43
CD40P25942 RPS7P12-201ENST00000422385 582 ntBASIC6.11□□□□□ -1.43
CD40P25942 GPN3P1-201ENST00000423883 535 ntBASIC6.11□□□□□ -1.43
CD40P25942 E2F6P1-201ENST00000428850 745 ntBASIC6.11□□□□□ -1.43
CD40P25942 AL121916.1-201ENST00000429405 308 ntBASIC6.11□□□□□ -1.43
CD40P25942 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.11□□□□□ -1.43
CD40P25942 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.11□□□□□ -1.43
CD40P25942 AL353093.1-201ENST00000441292 436 ntBASIC6.11□□□□□ -1.43
CD40P25942 LINC01832-201ENST00000446520 553 ntTSL 4 BASIC6.11□□□□□ -1.43
CD40P25942 TFP1-201ENST00000460564 572 ntTSL 4 BASIC6.11□□□□□ -1.43
CD40P25942 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 RPL23AP8-201ENST00000479812 475 ntBASIC6.11□□□□□ -1.43
CD40P25942 PRICKLE2-AS2-201ENST00000484703 496 ntTSL 3 BASIC6.11□□□□□ -1.43
CD40P25942 RN7SL267P-201ENST00000485107 261 ntBASIC6.11□□□□□ -1.43
CD40P25942 TFP1-203ENST00000490470 561 ntTSL 4 BASIC6.11□□□□□ -1.43
CD40P25942 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.11□□□□□ -1.43
CD40P25942 AC024451.1-201ENST00000508013 779 ntBASIC6.11□□□□□ -1.43
CD40P25942 RN7SKP11-201ENST00000517018 287 ntBASIC6.11□□□□□ -1.43
CD40P25942 snoZ278.1-201ENST00000517059 112 ntBASIC6.11□□□□□ -1.43
CD40P25942 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC6.11□□□□□ -1.43
CD40P25942 AC010306.1-201ENST00000523223 1117 ntBASIC6.11□□□□□ -1.43
CD40P25942 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC6.11□□□□□ -1.43
CD40P25942 AC008126.1-201ENST00000549019 480 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC069240.2-201ENST00000550242 609 ntBASIC6.11□□□□□ -1.43
CD40P25942 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 AC089984.3-201ENST00000552838 363 ntBASIC6.11□□□□□ -1.43
CD40P25942 AL355075.3-201ENST00000554678 492 ntTSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.11□□□□□ -1.43
CD40P25942 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC6.11□□□□□ -1.43
CD40P25942 MTCYBP28-201ENST00000566728 1132 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC005951.1-201ENST00000576706 485 ntBASIC6.11□□□□□ -1.43
CD40P25942 MIR3135A-201ENST00000578460 77 ntBASIC6.11□□□□□ -1.43
CD40P25942 MIR4428-201ENST00000584884 73 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC6.11□□□□□ -1.43
CD40P25942 AC009955.2-201ENST00000597288 542 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC121247.2-201ENST00000604776 136 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 OR8G7P-201ENST00000616658 848 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC092140.2-201ENST00000618027 521 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC067852.7-201ENST00000623270 535 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC109454.4-201ENST00000623411 649 ntBASIC6.11□□□□□ -1.43
CD40P25942 AC007490.1-201ENST00000624321 703 ntBASIC6.11□□□□□ -1.43
CD40P25942 GLUD1P2-202ENST00000630097 606 ntTSL 3 BASIC6.11□□□□□ -1.43
CD40P25942 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 TMC5-208ENST00000564959 2434 ntTSL 2 BASIC6.11□□□□□ -1.43
CD40P25942 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.11□□□□□ -1.43
CD40P25942 NPIPB9-202ENST00000550983 2123 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 AC020978.6-201ENST00000571197 3177 ntBASIC6.11□□□□□ -1.43
CD40P25942 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 ZFX-201ENST00000304543 2996 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 TOM1L1-220ENST00000575333 1849 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
CD40P25942 USP1-202ENST00000371146 3507 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CD40P25942 OPRM1-205ENST00000414028 2485 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 SLC16A4-210ENST00000541986 2496 ntTSL 2 BASIC6.1□□□□□ -1.43
CD40P25942 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 IL1B-201ENST00000263341 1631 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 OR5A2-201ENST00000302040 6318 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CD40P25942 FCGR1B-210ENST00000623603 1581 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 ADGRG7-201ENST00000273352 3140 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CD40P25942 SLC13A1-204ENST00000539873 2222 ntTSL 5 BASIC6.1□□□□□ -1.43
CD40P25942 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms