Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC7.89□□□□□ -1.15
LIG1P18858 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 AL161901.1-201ENST00000624954 3425 ntBASIC7.89□□□□□ -1.15
LIG1P18858 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.89□□□□□ -1.15
LIG1P18858 CCAT2-201ENST00000630920 1752 ntBASIC7.89□□□□□ -1.15
LIG1P18858 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 CPS1-203ENST00000430249 5698 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 TRG-AS1-201ENST00000629357 3645 ntTSL 2 BASIC7.89□□□□□ -1.15
LIG1P18858 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
LIG1P18858 AC087565.3-202ENST00000642085 1603 ntBASIC7.89□□□□□ -1.15
LIG1P18858 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 ARHGEF3-214ENST00000497267 2197 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 LINC02197-201ENST00000502659 2767 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC7.88□□□□□ -1.15
LIG1P18858 ZNF415-204ENST00000594011 2630 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 SEC62-201ENST00000337002 6568 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 FO082842.1-201ENST00000423552 1370 ntBASIC7.88□□□□□ -1.15
LIG1P18858 KYNUP2-201ENST00000582280 1329 ntBASIC7.88□□□□□ -1.15
LIG1P18858 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 MIR138-2-201ENST00000384916 84 ntBASIC7.88□□□□□ -1.15
LIG1P18858 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC7.88□□□□□ -1.15
LIG1P18858 AL121978.1-201ENST00000402778 359 ntBASIC7.88□□□□□ -1.15
LIG1P18858 RPL31-204ENST00000409038 817 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC7.88□□□□□ -1.15
LIG1P18858 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 AC006333.1-201ENST00000422401 410 ntTSL 3 BASIC7.88□□□□□ -1.15
LIG1P18858 OR5M12P-201ENST00000423388 929 ntBASIC7.88□□□□□ -1.15
LIG1P18858 FO393414.1-201ENST00000428697 1184 ntBASIC7.88□□□□□ -1.15
LIG1P18858 RPS26P4-201ENST00000431743 355 ntBASIC7.88□□□□□ -1.15
LIG1P18858 FTLP17-201ENST00000432567 525 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AC009299.3-203ENST00000435692 1096 ntTSL 5 BASIC7.88□□□□□ -1.15
LIG1P18858 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 AL353706.1-201ENST00000436728 494 ntBASIC7.88□□□□□ -1.15
LIG1P18858 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC7.88□□□□□ -1.15
LIG1P18858 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC7.88□□□□□ -1.15
LIG1P18858 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC7.88□□□□□ -1.15
LIG1P18858 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC7.88□□□□□ -1.15
LIG1P18858 ZNF736P5Y-201ENST00000451173 805 ntBASIC7.88□□□□□ -1.15
LIG1P18858 SCDP1-201ENST00000455244 1081 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AP002345.1-201ENST00000456493 928 ntBASIC7.88□□□□□ -1.15
LIG1P18858 WBP1LP1-201ENST00000460451 896 ntBASIC7.88□□□□□ -1.15
LIG1P18858 RPL34P34-201ENST00000465389 354 ntBASIC7.88□□□□□ -1.15
LIG1P18858 MTND4LP3-201ENST00000468320 276 ntBASIC7.88□□□□□ -1.15
LIG1P18858 RPL21P18-201ENST00000469899 480 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AC093719.1-201ENST00000480427 441 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AC025271.1-201ENST00000485045 429 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AL136537.1-201ENST00000508199 538 ntTSL 3 BASIC7.88□□□□□ -1.15
LIG1P18858 RPS20-202ENST00000518875 671 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 OXR1-212ENST00000521592 993 ntTSL 5 BASIC7.88□□□□□ -1.15
LIG1P18858 AC107952.1-201ENST00000524200 376 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 MTND4P33-201ENST00000556706 766 ntBASIC7.88□□□□□ -1.15
LIG1P18858 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 AP001122.1-201ENST00000572256 541 ntTSL 4 BASIC7.88□□□□□ -1.15
LIG1P18858 AC027281.1-201ENST00000574178 758 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AC012213.3-201ENST00000577199 777 ntBASIC7.88□□□□□ -1.15
LIG1P18858 DHFRP1-201ENST00000579682 559 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC7.88□□□□□ -1.15
LIG1P18858 AC103987.3-201ENST00000582071 292 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC7.88□□□□□ -1.15
LIG1P18858 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC7.88□□□□□ -1.15
LIG1P18858 AC068790.6-201ENST00000602558 258 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AC019080.4-201ENST00000606200 564 ntTSL 5 BASIC7.88□□□□□ -1.15
LIG1P18858 AC026951.2-201ENST00000613847 241 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AC243829.2-201ENST00000617914 470 ntTSL 3 BASIC7.88□□□□□ -1.15
LIG1P18858 AC098679.5-201ENST00000624394 571 ntBASIC7.88□□□□□ -1.15
LIG1P18858 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC7.88□□□□□ -1.15
LIG1P18858 AC026108.1-201ENST00000635444 547 ntBASIC7.88□□□□□ -1.15
LIG1P18858 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.88□□□□□ -1.15
LIG1P18858 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC7.88□□□□□ -1.15
LIG1P18858 SLC22A25-201ENST00000306494 1692 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 SCN2A-215ENST00000637266 8610 ntAPPRIS ALT1 TSL 5 BASIC7.88□□□□□ -1.15
LIG1P18858 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC7.88□□□□□ -1.15
LIG1P18858 OR5M2P-202ENST00000641241 4242 ntBASIC7.88□□□□□ -1.15
LIG1P18858 GRPR-201ENST00000380289 1929 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
LIG1P18858 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC7.87□□□□□ -1.15
LIG1P18858 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC7.87□□□□□ -1.15
LIG1P18858 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LIG1P18858 AC119674.1-204ENST00000641348 1343 ntBASIC7.87□□□□□ -1.15
LIG1P18858 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LIG1P18858 L3MBTL3-209ENST00000533560 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
LIG1P18858 TEX11-204ENST00000395889 3133 ntAPPRIS P3 TSL 2 BASIC7.87□□□□□ -1.15
LIG1P18858 RERGL-201ENST00000229002 1147 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
LIG1P18858 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
LIG1P18858 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
LIG1P18858 AL353625.1-202ENST00000366273 571 ntBASIC7.87□□□□□ -1.15
LIG1P18858 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC7.87□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms