Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 RNA5SP485-201ENST00000365053 119 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RNU6-207P-201ENST00000384137 107 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RNU6-481P-201ENST00000384194 107 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 HMGB1P13-201ENST00000406019 642 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC007091.1-201ENST00000412563 566 ntTSL 5 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RAD23BP2-201ENST00000416003 1207 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RPS24P7-201ENST00000416921 246 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RPL17P17-201ENST00000419491 557 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 DPPA2P1-201ENST00000428060 556 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 DLGAP5P1-201ENST00000430307 464 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 MTCO1P43-201ENST00000431831 488 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 ARF4P4-201ENST00000439608 520 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 CR769776.1-201ENST00000441254 787 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 COL11A2P1-205ENST00000441798 676 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RPL34P26-201ENST00000445636 354 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 MEF2AP1-201ENST00000454867 863 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC096922.1-201ENST00000461635 651 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC117532.1-201ENST00000514638 323 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 OSGEPL1-AS1-203ENST00000523895 567 ntTSL 4 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC125612.1-201ENST00000547580 377 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 MIR3135A-201ENST00000578460 77 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RN7SL199P-201ENST00000578752 281 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RN7SL656P-201ENST00000579044 281 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RN7SL270P-201ENST00000579643 281 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC093765.1-201ENST00000603758 881 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AP004372.1-201ENST00000604842 844 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 RBM11P1-201ENST00000604951 799 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AL353572.3-201ENST00000636536 670 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 AL157831.2-201ENST00000564681 3095 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 TSC22D1-212ENST00000611198 2877 ntTSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 TSC22D1-213ENST00000622051 2872 ntTSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 CDH12-208ENST00000522262 3028 ntTSL 2 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 BRCC3-203ENST00000369459 2641 ntTSL 5 BASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 LINC01613-201ENST00000561476 2780 ntBASIC9.11□□□□□ -0.95
CSB-PGBD3P0DP91 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AL590705.5-202ENST00000375204 3161 ntTSL 2 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 ZNF585B-204ENST00000531805 2971 ntTSL 2 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 ELMO1-202ENST00000396040 1982 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 UBXN8-201ENST00000265616 1450 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 ERBB3-221ENST00000553131 3237 ntTSL 2 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 CCDC169-202ENST00000239860 716 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 RNU6-906P-201ENST00000384700 70 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 RPL5P19-201ENST00000404228 893 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 BX119321.1-201ENST00000428912 797 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AL358794.1-201ENST00000445689 381 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 H3F3AP5-201ENST00000475267 429 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC091849.1-201ENST00000509920 121 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC087855.1-201ENST00000518178 430 ntTSL 3 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC010306.1-201ENST00000523223 1117 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AP003059.1-201ENST00000526206 432 ntTSL 5 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC006512.2-201ENST00000543250 486 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC078922.1-201ENST00000547547 434 ntTSL 3 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC104229.1-201ENST00000561364 255 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC008752.2-201ENST00000591174 750 ntTSL 3 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC121247.2-201ENST00000604776 136 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AL035410.2-201ENST00000604963 864 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 C8orf89-201ENST00000613105 495 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 OSTC-205ENST00000613215 876 ntTSL 2 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 CNTNAP3P1-201ENST00000616657 906 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC004232.3-201ENST00000622977 525 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC073488.2-201ENST00000631903 751 ntBASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
CSB-PGBD3P0DP91 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC9.1□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms