Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 OR4F17-201ENST00000318050 1054 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLPTM1O96005 OR4F4-201ENST00000326183 1054 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLPTM1O96005 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CLPTM1O96005 RN7SKP69-201ENST00000365390 305 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.78□□□□□ -1.48
CLPTM1O96005 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.78□□□□□ -1.48
CLPTM1O96005 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 SNORA7A-201ENST00000384765 139 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 MIR433-201ENST00000384837 93 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC240504.1-201ENST00000395709 845 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AL590635.1-201ENST00000406314 586 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AL354707.3-201ENST00000427308 331 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC138761.5-201ENST00000433967 325 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 NPM1P18-201ENST00000434232 732 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 FBXW12-203ENST00000436231 1117 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.78□□□□□ -1.48
CLPTM1O96005 LINC00349-201ENST00000448748 841 ntTSL 5 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC211433.1-201ENST00000450426 686 ntTSL 4 BASIC5.78□□□□□ -1.48
CLPTM1O96005 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 RPS4XP17-201ENST00000479057 754 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 RPL7AP23-201ENST00000482625 776 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AC105420.1-201ENST00000504389 582 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC091849.1-201ENST00000509920 121 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC106800.3-201ENST00000511389 308 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AC026774.2-201ENST00000513990 1098 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 SETP21-201ENST00000514799 892 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AC011416.1-201ENST00000514947 1732 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 RNA5SP318-201ENST00000516352 92 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 RNU6-551P-201ENST00000516661 103 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 PVT1-214ENST00000522875 922 ntTSL 5 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC107909.1-201ENST00000523226 595 ntTSL 5 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC5.78□□□□□ -1.48
CLPTM1O96005 RAB30-209ENST00000532548 644 ntTSL 3 BASIC5.78□□□□□ -1.48
CLPTM1O96005 OR4A43P-201ENST00000532938 908 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC5.78□□□□□ -1.48
CLPTM1O96005 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.78□□□□□ -1.48
CLPTM1O96005 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC006305.3-201ENST00000590589 454 ntTSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC5.78□□□□□ -1.48
CLPTM1O96005 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 DIMT1P1-201ENST00000603970 763 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AC020656.2-201ENST00000613291 5309 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 AL138693.1-201ENST00000622219 129 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 AC005514.1-201ENST00000623521 208 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CLPTM1O96005 MAPK10-328ENST00000641553 4009 ntBASIC5.78□□□□□ -1.48
CLPTM1O96005 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC5.78□□□□□ -1.48
CLPTM1O96005 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CLPTM1O96005 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.48
CLPTM1O96005 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
CLPTM1O96005 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLPTM1O96005 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLPTM1O96005 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
CLPTM1O96005 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CLPTM1O96005 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.77□□□□□ -1.49
CLPTM1O96005 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLPTM1O96005 ELMO1-203ENST00000396045 2524 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLPTM1O96005 PSG6-204ENST00000402603 1412 ntTSL 5 BASIC5.77□□□□□ -1.49
CLPTM1O96005 RNA5SP308-201ENST00000362532 115 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 FDPSP5-201ENST00000399474 1057 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 AL359694.1-201ENST00000403247 604 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 GNRHR-202ENST00000420975 859 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLPTM1O96005 CDC42P6-201ENST00000421246 576 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 AC007966.1-201ENST00000421998 1179 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC5.77□□□□□ -1.49
CLPTM1O96005 ATP6V1G1P4-201ENST00000438388 335 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.77□□□□□ -1.49
CLPTM1O96005 RPSAP40-201ENST00000442343 891 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 SNRPBP1-201ENST00000443634 282 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 WDR82P2-201ENST00000444540 928 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 VN1R96P-201ENST00000446052 858 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.77□□□□□ -1.49
CLPTM1O96005 NPM1P9-201ENST00000453156 844 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.77□□□□□ -1.49
CLPTM1O96005 SCG5-207ENST00000497208 949 ntTSL 5 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.77□□□□□ -1.49
CLPTM1O96005 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC5.77□□□□□ -1.49
CLPTM1O96005 MRPS5P3-201ENST00000515577 166 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 RN7SKP196-201ENST00000516267 345 ntBASIC5.77□□□□□ -1.49
CLPTM1O96005 SNORA48.9-201ENST00000516419 162 ntBASIC5.77□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms