Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC9.01□□□□□ -0.97
RAPGEF3O95398 AC138627.1-204ENST00000641894 765 ntBASIC9.01□□□□□ -0.97
RAPGEF3O95398 HLF-210ENST00000575345 3589 ntTSL 2 BASIC9.01□□□□□ -0.97
RAPGEF3O95398 XIST-206ENST00000434839 2865 ntTSL 5 BASIC9.01□□□□□ -0.97
RAPGEF3O95398 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC9□□□□□ -0.97
RAPGEF3O95398 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 EPGN-201ENST00000332112 847 ntTSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC9□□□□□ -0.97
RAPGEF3O95398 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 RN7SKP103-201ENST00000363848 320 ntBASIC9□□□□□ -0.97
RAPGEF3O95398 RNA5SP478-201ENST00000364657 115 ntBASIC9□□□□□ -0.97
RAPGEF3O95398 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 AL050335.1-201ENST00000396909 869 ntBASIC9□□□□□ -0.97
RAPGEF3O95398 RPS7P3-201ENST00000443360 580 ntBASIC9□□□□□ -0.97
RAPGEF3O95398 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC9□□□□□ -0.97
RAPGEF3O95398 AL049650.1-201ENST00000461548 823 ntAPPRIS P1 TSL 5 BASIC9□□□□□ -0.97
RAPGEF3O95398 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC9□□□□□ -0.97
RAPGEF3O95398 AC083795.1-201ENST00000491760 320 ntBASIC9□□□□□ -0.97
RAPGEF3O95398 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC9□□□□□ -0.97
RAPGEF3O95398 AC147055.3-201ENST00000510547 851 ntBASIC9□□□□□ -0.97
RAPGEF3O95398 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC9□□□□□ -0.97
RAPGEF3O95398 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC9□□□□□ -0.97
RAPGEF3O95398 RPA2P3-201ENST00000533268 770 ntBASIC9□□□□□ -0.97
RAPGEF3O95398 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC9□□□□□ -0.97
RAPGEF3O95398 CLMN-206ENST00000556441 452 ntTSL 5 BASIC9□□□□□ -0.97
RAPGEF3O95398 OR1F2P-201ENST00000570470 933 ntBASIC9□□□□□ -0.97
RAPGEF3O95398 SCG3-201ENST00000220478 3315 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
RAPGEF3O95398 ACSL5-201ENST00000354273 3353 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 OR2T6-202ENST00000641644 4670 ntAPPRIS P1 BASIC9□□□□□ -0.97
RAPGEF3O95398 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC9□□□□□ -0.97
RAPGEF3O95398 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC9□□□□□ -0.97
RAPGEF3O95398 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC9□□□□□ -0.97
RAPGEF3O95398 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 ZNF333-203ENST00000540689 3595 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AP001541.1-201ENST00000623322 1904 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 OR10K2-202ENST00000641042 3023 ntAPPRIS P1 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 ZNF841-202ENST00000426391 3620 ntTSL 2 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 ASB4-202ENST00000325885 3825 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC114786.1-201ENST00000512892 1415 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 MIR765-201ENST00000390226 114 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 RN7SKP213-201ENST00000410746 298 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AL022331.1-201ENST00000429025 477 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AL772161.1-201ENST00000439130 476 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC006978.2-201ENST00000442800 666 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 LINC01014-203ENST00000455307 548 ntTSL 2 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AL589740.1-201ENST00000457513 756 ntTSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 OR51K1P-201ENST00000510214 950 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 SUMO2P7-201ENST00000511179 285 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 RN7SKP66-201ENST00000516681 231 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC016993.1-201ENST00000547033 1258 ntTSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 EIF1AXP2-201ENST00000555940 413 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC015720.2-201ENST00000567709 334 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 NF1P10-201ENST00000613227 742 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 AC105105.5-201ENST00000622635 1294 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 AP000720.1-201ENST00000625091 483 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 BRD7P6-201ENST00000431406 1860 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 ALS2-201ENST00000264276 6644 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 MAPK10-377ENST00000642006 2752 ntBASIC8.99□□□□□ -0.97
RAPGEF3O95398 PLXDC2-203ENST00000377252 12468 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 PRUNE1-202ENST00000368934 2214 ntTSL 2 BASIC8.99□□□□□ -0.97
RAPGEF3O95398 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
RAPGEF3O95398 ADGRB3-203ENST00000546190 4569 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 MYPN-201ENST00000354393 4596 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 HMCN2-206ENST00000624552 15610 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AL139805.2-201ENST00000455305 2433 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
RAPGEF3O95398 MIR433-201ENST00000384837 93 ntBASIC8.98□□□□□ -0.97
RAPGEF3O95398 CYTOR-204ENST00000409898 560 ntTSL 5 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC8.98□□□□□ -0.97
RAPGEF3O95398 NMD3P2-201ENST00000421815 761 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms