Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AL133467.3-203ENST00000461160 3574 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 SZT2-210ENST00000634258 11045 ntAPPRIS ALT2 TSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 KLHL5-201ENST00000261425 3425 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 AC105101.1-201ENST00000623698 2873 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 ARMCX3-207ENST00000537169 3318 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 ZMYND8-212ENST00000458360 3729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.23□□□□□ -1.09
TMEM88BA6NKF7 NOLC1-209ENST00000605788 3932 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 CACNB2-213ENST00000612134 3825 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 SEMA3C-203ENST00000419255 2415 ntAPPRIS P1 TSL 2 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 CHD7-202ENST00000524602 3456 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 DLG2-229ENST00000531015 2892 ntTSL 2 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 WDR19-201ENST00000399820 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 ABCB1-210ENST00000543898 4524 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 C1orf158-203ENST00000614859 3549 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 NASP-203ENST00000372052 1458 ntAPPRIS ALT2 TSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 FAM204BP-201ENST00000369171 701 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC093716.1-201ENST00000435923 377 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC092106.2-201ENST00000436597 487 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 NPM1P33-201ENST00000438918 872 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 MTCYBP34-201ENST00000439552 670 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 GABRG3-AS1-201ENST00000439938 970 ntTSL 2 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC015983.1-201ENST00000441577 373 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 ALMS1-IT1-201ENST00000441587 2107 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC005808.1-201ENST00000444112 381 ntTSL 2 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AL392046.1-201ENST00000450742 569 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 RPS27AP2-201ENST00000457576 465 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC110749.1-201ENST00000462007 357 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 PSAT1P4-201ENST00000466500 526 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 SYPL1P1-201ENST00000473622 768 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 MTCYBP16-201ENST00000509187 1129 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 NR3C2-207ENST00000511528 2967 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 RNU6-1308P-201ENST00000516817 103 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC008691.1-202ENST00000521472 811 ntTSL 3 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 IGLVV-66-201ENST00000523818 341 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC090115.2-201ENST00000548060 883 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC060809.1-201ENST00000559211 564 ntTSL 4 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AADACP1-206ENST00000561502 1193 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC027104.1-201ENST00000563702 681 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC103987.3-201ENST00000582071 292 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC090616.2-202ENST00000584248 222 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC122133.1-201ENST00000613964 233 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 TSPAN6-205ENST00000614008 900 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AL158163.2-201ENST00000619110 700 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 CCL4L2-217ENST00000620250 667 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 XIRP2-202ENST00000409043 3292 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 TPD52-213ENST00000520527 2638 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 POF1B-202ENST00000373145 1972 ntAPPRIS ALT2 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 AC138207.6-201ENST00000579164 1967 ntBASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 ARPP21-203ENST00000396482 2416 ntTSL 2 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 HNRNPC-211ENST00000554455 1784 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 KLHL2-202ENST00000421009 2452 ntTSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 SMG1P4-203ENST00000517529 1589 ntTSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 ZNF334-201ENST00000347606 3890 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC8.22□□□□□ -1.09
TMEM88BA6NKF7 L3MBTL4-203ENST00000400105 3546 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 AL121835.2-201ENST00000624253 3502 ntBASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 TRPM1-202ENST00000397795 5687 ntAPPRIS P3 TSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 PTPRT-204ENST00000373190 12559 ntAPPRIS ALT2 TSL 5 BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 SORBS2-221ENST00000437304 3381 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 ERCC4-201ENST00000311895 6758 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 NEK5-201ENST00000355568 2918 ntAPPRIS P1 TSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
TMEM88BA6NKF7 EYA3-208ENST00000540618 5885 ntTSL 2 BASIC8.21□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms