Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 AC010327.2-201ENST00000587647 488 ntBASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AC068724.3-201ENST00000625906 87 ntBASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 FCRL5-201ENST00000361835 5390 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 DSG3-201ENST00000257189 5525 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 ABCA11P-202ENST00000504019 2110 ntBASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 HRNR-201ENST00000368801 9623 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 PAN2-202ENST00000425394 5372 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 SCP2-212ENST00000488965 3926 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 SH3D19-203ENST00000409598 5284 ntAPPRIS ALT1 TSL 1 (best) BASIC9.24□□□□□ -0.93
RIMBP3Q9UFD9 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AC073264.2-201ENST00000448886 166 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 RPL37AP8-201ENST00000494116 276 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 IGKV2D-10-201ENST00000520194 281 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 ZNF286A-221ENST00000593105 5222 ntTSL 3 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 NEK2P4-201ENST00000425793 1329 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AL512310.3-201ENST00000547023 1335 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 ARHGEF11-202ENST00000368194 6889 ntAPPRIS P4 TSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 PIGN-238ENST00000639758 4239 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 WDFY2-201ENST00000298125 9321 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 GALR1-201ENST00000299727 10044 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 KIAA0930-202ENST00000336156 8119 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AL353625.1-202ENST00000366273 571 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 DNAJA1P4-201ENST00000406473 1166 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 SNORA11.2-201ENST00000408318 127 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AC006335.2-201ENST00000437993 330 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 RN7SL447P-201ENST00000494711 245 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 LINC01217-201ENST00000514427 562 ntTSL 4 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 OR6M2P-201ENST00000529831 871 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AL161616.1-201ENST00000611867 286 ntBASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 CTAGE1-201ENST00000391403 4313 ntAPPRIS P2 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 DRP2-202ENST00000395209 7277 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 TACC1-207ENST00000519416 5510 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC9.23□□□□□ -0.93
RIMBP3Q9UFD9 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 AC005332.9-201ENST00000620266 2921 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 ESRP1-204ENST00000454170 3482 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 PEX13-201ENST00000295030 4470 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 SPATA31A1-201ENST00000377647 4256 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 COL28A1-201ENST00000399429 4277 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 ARHGEF9-222ENST00000636048 5059 ntTSL 5 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 GPR19-203ENST00000540510 1751 ntAPPRIS P1 TSL 2 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 MIR433-201ENST00000384837 93 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 AC099677.3-201ENST00000427081 395 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 RPL21P129-201ENST00000491732 478 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 KRTAP5-14P-201ENST00000502328 121 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 SSX8-201ENST00000506270 579 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 AC139365.2-201ENST00000517972 253 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 OR7E158P-201ENST00000524483 910 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 NMNAT1P5-201ENST00000559657 841 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 POLH-201ENST00000372226 3322 ntTSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 DLG2-209ENST00000418306 3027 ntTSL 2 BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 UGT2B25P-201ENST00000511504 1586 ntBASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 KCTD6-201ENST00000355076 2425 ntAPPRIS P1 TSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC9.22□□□□□ -0.93
RIMBP3Q9UFD9 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC9.21□□□□□ -0.93
RIMBP3Q9UFD9 ATAD5-201ENST00000321990 6869 ntAPPRIS P1 TSL 1 (best) BASIC9.21□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms