Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 MT4-201ENST00000219162 294 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 TRMT13-202ENST00000370141 3129 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 SNORA17A-201ENST00000391185 133 ntBASIC5.78□□□□□ -1.48
CCDC88CQ9P219 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 USP40-202ENST00000409945 1946 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 AC015977.1-201ENST00000418887 292 ntBASIC5.78□□□□□ -1.48
CCDC88CQ9P219 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 AP000281.1-201ENST00000444036 316 ntBASIC5.78□□□□□ -1.48
CCDC88CQ9P219 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 IGKV1D-22-201ENST00000518953 324 ntBASIC5.78□□□□□ -1.48
CCDC88CQ9P219 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 AP001437.1-201ENST00000608783 456 ntBASIC5.78□□□□□ -1.48
CCDC88CQ9P219 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 SNORA17.5-201ENST00000630429 132 ntBASIC5.78□□□□□ -1.48
CCDC88CQ9P219 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 NOL8-208ENST00000442668 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 VPS13A-202ENST00000357409 9967 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
CCDC88CQ9P219 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.48
CCDC88CQ9P219 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC130360.1-201ENST00000425489 1117 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 IGLVIV-64-201ENST00000518581 301 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC130365.2-201ENST00000525882 1201 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC021269.1-201ENST00000526860 705 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC092865.1-201ENST00000544395 1023 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC090826.1-203ENST00000569235 490 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC006924.1-201ENST00000610750 559 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AL136097.3-201ENST00000611097 505 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 MIR6809-201ENST00000612189 116 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 LINGO2-204ENST00000613945 2981 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 COX6B1P3-201ENST00000312310 260 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 BX284632.2-201ENST00000421091 399 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AL512605.1-202ENST00000441919 381 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AL359955.2-201ENST00000445380 353 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC092967.1-201ENST00000449016 481 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 RPA2P1-201ENST00000556557 721 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC009120.4-201ENST00000564455 513 ntTSL 5 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AC008521.2-201ENST00000591021 259 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 AP000894.4-201ENST00000610185 483 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 UBE3A-205ENST00000566215 3176 ntAPPRIS P3 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 IMMTP1-201ENST00000435590 2219 ntBASIC5.77□□□□□ -1.49
CCDC88CQ9P219 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
CCDC88CQ9P219 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 AP004289.1-201ENST00000436307 2205 ntBASIC5.76□□□□□ -1.49
CCDC88CQ9P219 TBC1D15-201ENST00000319106 2159 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 AL445238.1-204ENST00000400311 463 ntBASIC5.76□□□□□ -1.49
CCDC88CQ9P219 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 STARD6-202ENST00000577499 696 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 AC027334.1-201ENST00000603257 310 ntBASIC5.76□□□□□ -1.49
CCDC88CQ9P219 CDC37L1-AS1-202ENST00000609131 235 ntTSL 2 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 PSG4-201ENST00000244295 1629 ntTSL 1 (best) BASIC5.76□□□□□ -1.49
CCDC88CQ9P219 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.76□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms