Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 KLRG1-202ENST00000356986 1206 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 SNORD113-6-201ENST00000363345 75 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 MICG-208ENST00000416822 132 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 RPL7P53-201ENST00000421245 739 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AL359633.1-201ENST00000421403 310 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 GTF2IP23-201ENST00000423746 351 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC234781.2-201ENST00000426370 994 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 NANOGP4-201ENST00000427230 913 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 RPL23AP19-201ENST00000436229 369 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AL592114.2-201ENST00000440142 532 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 IGKV1OR2-2-201ENST00000451163 355 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC026348.1-201ENST00000462549 1053 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 RN7SL149P-201ENST00000465197 281 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 CBX5P1-201ENST00000468470 561 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 RPL22-208ENST00000497965 786 ntTSL 2 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 RN7SL775P-201ENST00000498361 336 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC093755.1-201ENST00000512950 1023 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC108471.1-201ENST00000513977 287 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AP002373.2-201ENST00000541631 1060 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 LYZ-202ENST00000548839 558 ntTSL 2 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AL358913.1-201ENST00000554342 121 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC010327.2-201ENST00000587647 488 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 ZNF397-211ENST00000592264 1104 ntTSL 3 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC010605.1-201ENST00000597303 797 ntTSL 2 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AL139407.1-201ENST00000613826 1175 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC025162.2-201ENST00000619602 560 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC068137.4-201ENST00000638485 296 ntBASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 CPNE4-208ENST00000511604 2503 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 NBEA-202ENST00000379922 3794 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 MTMR8-201ENST00000374852 2639 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 PGM3-212ENST00000513973 6107 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 CA5B-201ENST00000318636 6835 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 PGAP1-201ENST00000354764 11114 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 LINC01653-201ENST00000456026 1728 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
TRAIPQ9BWF2 AC126773.4-201ENST00000612545 3043 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC107980.1-201ENST00000558671 3355 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 TMTC2-204ENST00000549919 6211 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 TMEM170B-201ENST00000379426 8362 ntAPPRIS P1 TSL 4 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 ZNF587B-201ENST00000442832 3339 ntTSL 2 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 CASC19-243ENST00000641588 1546 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AL445250.1-203ENST00000641829 1535 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC023886.2-201ENST00000321285 411 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 OR5D18-201ENST00000333976 991 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 RNU6-317P-201ENST00000384031 107 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC114814.2-201ENST00000419195 485 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 GAPDHP69-201ENST00000425504 1008 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 GAS5-211ENST00000432536 959 ntTSL 2 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 RPL23AP12-201ENST00000467573 473 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 RPL21P42-201ENST00000488408 464 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC079594.1-201ENST00000489757 331 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 OR7E163P-201ENST00000505943 894 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC021193.1-201ENST00000511607 420 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 RNA5SP96-201ENST00000516041 107 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 NRG1-IT3-201ENST00000519023 505 ntTSL 3 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 LINC01603-202ENST00000519557 712 ntTSL 3 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AP003084.1-201ENST00000524828 742 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 LINC00964-204ENST00000528090 572 ntTSL 4 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AL162171.2-201ENST00000555444 905 ntTSL 3 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 PIGPP4-201ENST00000584447 307 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC010620.1-201ENST00000601088 1102 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC018638.7-201ENST00000605836 1114 ntBASIC8.05□□□□□ -1.12
TRAIPQ9BWF2 AC244196.4-201ENST00000611787 392 ntAPPRIS P1 BASIC8.05□□□□□ -1.12
Retrieved 100 of 98,524 protein–RNA pairs in 114.4 ms