Protein–RNA interactions for Protein: Q96M83

CCDC7, Coiled-coil domain-containing protein 7, humanhuman

Predictions only

Length 1,385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7Q96M83 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC8.41□□□□□ -1.06
CCDC7Q96M83 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 PLA2R1-201ENST00000283243 14371 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC7Q96M83 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 CRP-204ENST00000368112 787 ntTSL 2 BASIC8.41□□□□□ -1.06
CCDC7Q96M83 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC8.41□□□□□ -1.06
CCDC7Q96M83 RAB28P2-201ENST00000454299 641 ntBASIC8.41□□□□□ -1.06
CCDC7Q96M83 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC7Q96M83 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC7Q96M83 RPS4XP14-201ENST00000493072 781 ntBASIC8.41□□□□□ -1.06
CCDC7Q96M83 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC7Q96M83 SCARNA18.1-201ENST00000516330 83 ntBASIC8.41□□□□□ -1.06
CCDC7Q96M83 OR7E158P-201ENST00000524483 910 ntBASIC8.41□□□□□ -1.06
CCDC7Q96M83 AC090236.2-201ENST00000587933 1101 ntBASIC8.41□□□□□ -1.06
CCDC7Q96M83 AL645933.2-201ENST00000606743 1207 ntBASIC8.41□□□□□ -1.06
CCDC7Q96M83 AL355974.3-201ENST00000617383 467 ntBASIC8.41□□□□□ -1.06
CCDC7Q96M83 ZNF148-201ENST00000360647 9651 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 DNAJC6-203ENST00000395325 5743 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC8.41□□□□□ -1.06
CCDC7Q96M83 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC8.41□□□□□ -1.06
CCDC7Q96M83 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
CCDC7Q96M83 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 OR52B3P-201ENST00000314715 928 ntBASIC8.4□□□□□ -1.06
CCDC7Q96M83 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 GAS5-202ENST00000414075 413 ntTSL 2 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 RPS26P38-201ENST00000414476 348 ntBASIC8.4□□□□□ -1.06
CCDC7Q96M83 BMS1P13-201ENST00000417301 885 ntBASIC8.4□□□□□ -1.06
CCDC7Q96M83 RPS7P8-201ENST00000418311 581 ntBASIC8.4□□□□□ -1.06
CCDC7Q96M83 SEPT14P12-201ENST00000442280 560 ntBASIC8.4□□□□□ -1.06
CCDC7Q96M83 BMS1P10-201ENST00000443754 1120 ntBASIC8.4□□□□□ -1.06
CCDC7Q96M83 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
CCDC7Q96M83 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 AC027544.3-201ENST00000535082 757 ntBASIC8.4□□□□□ -1.06
CCDC7Q96M83 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC8.4□□□□□ -1.06
CCDC7Q96M83 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
CCDC7Q96M83 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
CCDC7Q96M83 CREB5-201ENST00000357727 8532 ntAPPRIS P4 TSL 1 (best) BASIC8.4□□□□□ -1.06
CCDC7Q96M83 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.07
CCDC7Q96M83 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.4□□□□□ -1.07
CCDC7Q96M83 IBTK-210ENST00000610980 5195 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 AC245096.1-201ENST00000413104 546 ntBASIC8.39□□□□□ -1.07
CCDC7Q96M83 MTND4LP17-201ENST00000414607 293 ntBASIC8.39□□□□□ -1.07
CCDC7Q96M83 RPL35AP3-201ENST00000414680 288 ntBASIC8.39□□□□□ -1.07
CCDC7Q96M83 NMD3P2-201ENST00000421815 761 ntBASIC8.39□□□□□ -1.07
CCDC7Q96M83 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 AP001804.1-201ENST00000526868 919 ntBASIC8.39□□□□□ -1.07
CCDC7Q96M83 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 AC108673.3-201ENST00000609183 335 ntBASIC8.39□□□□□ -1.07
CCDC7Q96M83 AC022467.1-201ENST00000614738 749 ntBASIC8.39□□□□□ -1.07
CCDC7Q96M83 AC073488.3-201ENST00000631611 778 ntBASIC8.39□□□□□ -1.07
CCDC7Q96M83 STAG1-201ENST00000236698 5951 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 SLC6A14-202ENST00000598581 4520 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 ATP5A1P4-201ENST00000556888 1605 ntBASIC8.39□□□□□ -1.07
CCDC7Q96M83 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC8.39□□□□□ -1.07
CCDC7Q96M83 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC8.39□□□□□ -1.07
CCDC7Q96M83 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 OR10R3P-201ENST00000361688 942 ntBASIC8.38□□□□□ -1.07
CCDC7Q96M83 RNU1-134P-201ENST00000362935 165 ntBASIC8.38□□□□□ -1.07
CCDC7Q96M83 RNA5SP211-201ENST00000365516 117 ntBASIC8.38□□□□□ -1.07
CCDC7Q96M83 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC8.38□□□□□ -1.07
CCDC7Q96M83 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 ACA64.1-201ENST00000459171 127 ntBASIC8.38□□□□□ -1.07
CCDC7Q96M83 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC8.38□□□□□ -1.07
CCDC7Q96M83 RNA5SP438-201ENST00000516561 112 ntBASIC8.38□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 72.6 ms