Protein–RNA interactions for Protein: Q96LT7

C9orf72, Guanine nucleotide exchange C9orf72, humanhuman

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72Q96LT7 AC008055.1-201ENST00000547032 609 ntBASIC6.24□□□□□ -1.41
C9orf72Q96LT7 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 AC005632.2-201ENST00000564271 828 ntBASIC6.24□□□□□ -1.41
C9orf72Q96LT7 AP003774.2-201ENST00000569737 558 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 AC022106.1-201ENST00000612834 766 ntBASIC6.24□□□□□ -1.41
C9orf72Q96LT7 AC010998.3-201ENST00000613871 631 ntBASIC6.24□□□□□ -1.41
C9orf72Q96LT7 MIR6811-201ENST00000620409 58 ntBASIC6.24□□□□□ -1.41
C9orf72Q96LT7 AP001052.1-201ENST00000626421 99 ntBASIC6.24□□□□□ -1.41
C9orf72Q96LT7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
C9orf72Q96LT7 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 NCOA4P2-201ENST00000340589 1813 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AL161756.3-201ENST00000641216 2071 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 RNU1-49P-201ENST00000363468 159 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 DHFRP2-201ENST00000414224 547 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 OSTCP4-201ENST00000424397 449 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 POU5F1P5-201ENST00000445059 658 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AL162739.1-201ENST00000450606 307 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 RN7SL352P-201ENST00000466002 277 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 RN7SL326P-201ENST00000477493 296 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AC124945.1-201ENST00000485133 188 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 SNX18P24-201ENST00000505249 671 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 HSD3BP3-201ENST00000514706 994 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 Y_RNA.710-201ENST00000516975 110 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 IGKV2-19-201ENST00000518132 283 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 IGHVII-60-1-201ENST00000519079 256 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AC011601.1-201ENST00000549710 577 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AC134669.1-201ENST00000581275 672 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AL499605.1-201ENST00000604628 403 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 RN7SL261P-201ENST00000613441 282 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.23□□□□□ -1.41
C9orf72Q96LT7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 ERAP2-202ENST00000437043 5705 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.23□□□□□ -1.41
C9orf72Q96LT7 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 AC037459.2-201ENST00000514980 4076 ntTSL 2 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 BX284613.1-201ENST00000452221 1641 ntBASIC6.22□□□□□ -1.41
C9orf72Q96LT7 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 CASC19-246ENST00000641625 1606 ntBASIC6.22□□□□□ -1.41
C9orf72Q96LT7 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 RNA5SP375-201ENST00000362975 119 ntBASIC6.22□□□□□ -1.41
C9orf72Q96LT7 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 PTCD2P2-201ENST00000415579 1095 ntBASIC6.22□□□□□ -1.41
C9orf72Q96LT7 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 AC108479.1-201ENST00000431142 427 ntBASIC6.22□□□□□ -1.41
C9orf72Q96LT7 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 RPL5P10-201ENST00000445207 894 ntBASIC6.22□□□□□ -1.41
C9orf72Q96LT7 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.22□□□□□ -1.41
C9orf72Q96LT7 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms