Protein–RNA interactions for Protein: Q96II8

LRCH3, Leucine-rich repeat and calponin homology domain-containing protein 3, humanhuman

Predictions only

Length 777 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3Q96II8 AC114786.1-201ENST00000512892 1415 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 PDZK1-202ENST00000417171 2230 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 TRBV10-1-201ENST00000390364 412 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC004830.1-201ENST00000420449 285 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC066692.1-201ENST00000421721 457 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 MTCO1P3-201ENST00000429327 192 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 RPL12P4-201ENST00000432629 497 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 BACH1-IT2-201ENST00000436529 806 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AL606534.2-201ENST00000436756 624 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 LDHAP2-201ENST00000437325 985 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC005099.1-201ENST00000442083 610 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC009244.1-201ENST00000450566 258 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC079776.3-201ENST00000450665 370 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AL033528.1-201ENST00000453780 140 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 RN7SL761P-201ENST00000463259 278 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 CTLA4-204ENST00000472206 277 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 TMED10P2-201ENST00000474255 612 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 RPL12P32-201ENST00000484010 494 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 SNRPCP11-201ENST00000492453 205 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 B4GALNT2P1-201ENST00000508857 307 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 LINC02223-203ENST00000514771 781 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 ALG9-IT1-201ENST00000531305 684 ntTSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC079363.1-201ENST00000551366 1125 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC011611.1-201ENST00000552179 197 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 COX6CP11-201ENST00000555293 229 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC044913.1-201ENST00000557200 430 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC007495.1-202ENST00000565155 559 ntTSL 2 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC025678.1-201ENST00000567861 338 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC022916.3-201ENST00000592961 742 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC007687.1-201ENST00000602704 304 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC129492.5-201ENST00000603489 315 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AL844908.1-201ENST00000609953 652 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AL139089.1-201ENST00000620372 975 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 TEX41-265ENST00000627785 704 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 ANAPC1-210ENST00000628342 450 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC132825.8-201ENST00000640783 297 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 ETV3-202ENST00000368192 5254 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 MEF2C-239ENST00000636294 2576 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 TAGAP-203ENST00000367066 3887 ntAPPRIS P4 TSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 CD46-206ENST00000360212 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 AC079298.1-201ENST00000625026 1619 ntBASIC8.75□□□□□ -1.01
LRCH3Q96II8 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 MAP3K20-208ENST00000539448 2312 ntTSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 ZBTB40-201ENST00000374651 8368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 HGD-201ENST00000283871 2005 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
LRCH3Q96II8 MAGI2-214ENST00000628781 2013 ntTSL 2 BASIC8.75□□□□□ -1.01
LRCH3Q96II8 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 MAGI1-IT1-201ENST00000460754 2567 ntTSL 2 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC009163.7-201ENST00000621929 2557 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 C1D-202ENST00000407324 1379 ntTSL 3 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 UAP1-202ENST00000367924 2066 ntAPPRIS ALT1 TSL 5 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 BRDT-203ENST00000370389 3696 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 BCAS1-202ENST00000395961 3303 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 LINC01616-201ENST00000561816 2280 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 RBM5-201ENST00000347869 3188 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 LINC00558-201ENST00000569422 3163 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 FAM193A-203ENST00000502458 4083 ntAPPRIS ALT2 TSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 SUPT16H-201ENST00000216297 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 MAGEE1-201ENST00000361470 3630 ntAPPRIS P1 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 RBM46-202ENST00000510397 3626 ntTSL 2 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC011369.1-201ENST00000517408 2181 ntTSL 3 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 SNRNP40-202ENST00000373720 1087 ntTSL 1 (best) BASIC8.74□□□□□ -1.01
LRCH3Q96II8 HMGB3P1-201ENST00000393368 573 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 SNRPEP2-201ENST00000397592 279 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AL109918.1-202ENST00000406724 436 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 FCF1P2-201ENST00000415284 583 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 RPS7P15-201ENST00000415804 584 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AL359633.1-201ENST00000421403 310 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC105052.2-201ENST00000434317 794 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC242426.1-201ENST00000435270 960 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 EHHADH-202ENST00000440662 656 ntTSL 3 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC012501.1-201ENST00000454312 555 ntTSL 4 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC018638.3-201ENST00000461273 132 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 AC087312.1-201ENST00000471411 480 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 RPS4XP17-201ENST00000479057 754 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 RPS7P6-201ENST00000485777 579 ntBASIC8.74□□□□□ -1.01
LRCH3Q96II8 HSD17B11-203ENST00000507286 851 ntTSL 5 BASIC8.74□□□□□ -1.01
LRCH3Q96II8 PAICSP4-201ENST00000517543 1253 ntBASIC8.74□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 94 ms