Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 OFD1P15Y-201ENST00000411536 1392 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 TRPM3-209ENST00000377110 12258 ntAPPRIS ALT1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 RPL11P4-201ENST00000332269 436 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 PSMA6P1-201ENST00000400275 741 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC104777.1-202ENST00000413247 774 ntTSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC084030.1-202ENST00000413385 880 ntTSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 ARMC4P1-201ENST00000438905 707 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 CXCR2P1-202ENST00000443392 1074 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC124945.1-201ENST00000485133 188 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 SNORA74.1-201ENST00000516320 180 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC016405.1-202ENST00000524348 758 ntTSL 3 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC244502.2-201ENST00000543361 851 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC092865.1-201ENST00000544395 1023 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AC025857.2-201ENST00000602711 238 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 AL137067.2-201ENST00000621202 131 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 LINC01613-201ENST00000561476 2780 ntBASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 BACH1-202ENST00000399921 5769 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RTN4IP1Q8WWV3 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 FAM114A2-201ENST00000351797 4443 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 UNC80-203ENST00000439458 13562 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 SNORA77.2-201ENST00000408571 112 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 RN7SKP146-201ENST00000410242 334 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 RN7SKP121-201ENST00000410842 305 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 MTND2P12-201ENST00000417560 1252 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 LINC00867-203ENST00000445161 580 ntTSL 2 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 RPL23AP60-201ENST00000450011 454 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 CR383656.1-201ENST00000484916 377 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 RN7SL612P-201ENST00000497704 295 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 TOMM22P4-201ENST00000511318 336 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 RNU6ATAC39P-201ENST00000516309 149 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 AC010998.3-201ENST00000613871 631 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 RABGAP1L-208ENST00000392064 6282 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 TCF7L2-206ENST00000355995 4073 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 AC138907.8-201ENST00000623981 2256 ntBASIC5.07□□□□□ -1.6
RTN4IP1Q8WWV3 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
RTN4IP1Q8WWV3 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.06□□□□□ -1.6
RTN4IP1Q8WWV3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 109.1 ms