Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AC027796.1-201ENST00000575593 512 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AC005332.4-201ENST00000592752 579 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AC125494.2-201ENST00000602431 657 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AC036176.3-201ENST00000602456 418 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AL021368.3-201ENST00000607119 578 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AC104307.1-201ENST00000616142 196 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AC253576.2-201ENST00000618815 580 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AP003400.2-201ENST00000624036 666 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 SMCO1-201ENST00000397537 1812 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 SMG1P5-202ENST00000529428 4219 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 SMG1P2-201ENST00000566127 4221 ntBASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
CLIP4Q8N3C7 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 TET1P1-201ENST00000426627 2301 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC004656.1-201ENST00000568479 4951 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 COPB2-205ENST00000507777 3034 ntTSL 2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 SCML2-202ENST00000398048 1334 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 C5orf64-203ENST00000505642 2970 ntTSL 2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AL139352.1-201ENST00000255183 1001 ntTSL 2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 MIR433-201ENST00000384837 93 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 RNU11-6P-201ENST00000391127 133 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 ARSFP1-201ENST00000398758 477 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC092651.1-201ENST00000426110 312 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AL390879.2-203ENST00000426943 1121 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC100823.1-201ENST00000442274 480 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 SNORA26.10-201ENST00000516427 141 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC008056.2-201ENST00000553812 551 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AL161757.3-201ENST00000555316 807 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 CT45A3-202ENST00000598716 855 ntAPPRIS P1 TSL 3 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AL591222.2-201ENST00000604443 754 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AC006924.1-201ENST00000610750 559 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AL589743.6-201ENST00000611025 117 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AL589182.1-201ENST00000611785 320 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 OR1N2-202ENST00000616791 993 ntAPPRIS P2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 MTCO1P1-201ENST00000624263 1081 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AP001541.1-201ENST00000623322 1904 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 AADAC-201ENST00000232892 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 DNM1P47-203ENST00000571780 12667 ntBASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
CLIP4Q8N3C7 SAMM50P1-201ENST00000455403 1399 ntBASIC5.8□□□□□ -1.48
CLIP4Q8N3C7 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.8□□□□□ -1.48
CLIP4Q8N3C7 UGT2B24P-201ENST00000514441 1597 ntBASIC5.8□□□□□ -1.48
CLIP4Q8N3C7 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP4Q8N3C7 AC092692.1-201ENST00000623625 2595 ntBASIC5.8□□□□□ -1.48
CLIP4Q8N3C7 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
CLIP4Q8N3C7 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.8□□□□□ -1.48
CLIP4Q8N3C7 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.8□□□□□ -1.48
CLIP4Q8N3C7 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms