Protein–RNA interactions for Protein: Q7RTU7

SCX, Basic helix-loop-helix transcription factor scleraxis, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCXQ7RTU7 AL354718.1-201ENST00000619764 589 ntBASIC4.13□□□□□ -1.75
SCXQ7RTU7 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SCXQ7RTU7 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 AL359742.1-201ENST00000622497 540 ntBASIC4.13□□□□□ -1.75
SCXQ7RTU7 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 AL355480.1-201ENST00000629041 99 ntBASIC4.13□□□□□ -1.75
SCXQ7RTU7 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 LINC02341-201ENST00000637043 824 ntTSL 3 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 AC011504.1-201ENST00000623331 4103 ntBASIC4.13□□□□□ -1.75
SCXQ7RTU7 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCXQ7RTU7 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCXQ7RTU7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 CA1-225ENST00000626824 2405 ntTSL 5 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 AC083837.1-201ENST00000565297 2994 ntBASIC4.13□□□□□ -1.75
SCXQ7RTU7 CASC19-246ENST00000641625 1606 ntBASIC4.13□□□□□ -1.75
SCXQ7RTU7 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 TRIM34-204ENST00000514226 2493 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCXQ7RTU7 CASC19-255ENST00000641733 1385 ntBASIC4.13□□□□□ -1.75
SCXQ7RTU7 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCXQ7RTU7 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.13□□□□□ -1.75
SCXQ7RTU7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SCXQ7RTU7 AL136317.2-201ENST00000619851 2254 ntTSL 2 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 ARHGEF38-201ENST00000265154 1437 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 MTCO1P25-201ENST00000414449 1799 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 MYCBP2-212ENST00000612956 1542 ntTSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 RPL31P11-201ENST00000426558 1558 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC117402.1-202ENST00000383686 820 ntTSL 2 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 GCNT1P4-201ENST00000404096 329 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 RNA5SP251-201ENST00000410614 137 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 BX284668.3-201ENST00000414128 882 ntTSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 MTND2P12-201ENST00000417560 1252 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 RPL21P50-201ENST00000417698 477 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC115283.1-201ENST00000427353 400 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC069154.1-201ENST00000432914 542 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC007679.3-201ENST00000434035 414 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 GTF2IP14-201ENST00000441415 586 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 CXCR2P1-202ENST00000443392 1074 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 OR2L9P-201ENST00000444456 913 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC144530.1-201ENST00000452862 555 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC091544.1-201ENST00000484702 348 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 RPL5P14-201ENST00000494197 878 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 CBX1-205ENST00000495350 550 ntTSL 2 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC131392.1-201ENST00000506490 633 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 ZNF519P4-201ENST00000514008 125 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 OR4A13P-201ENST00000529316 942 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC069234.2-202ENST00000535720 583 ntTSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 RPSAP75-201ENST00000605848 301 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AL137246.2-201ENST00000613439 662 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AL138960.1-201ENST00000613838 513 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AL031658.2-201ENST00000616850 651 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 MIR6085-201ENST00000618314 110 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC120057.5-201ENST00000623840 154 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AP001962.1-201ENST00000624114 559 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 LINC02495-203ENST00000636704 242 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 AL357140.4-201ENST00000636827 412 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AL359955.1-201ENST00000455242 3275 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 AC011455.2-201ENST00000599320 3336 ntBASIC4.12□□□□□ -1.75
SCXQ7RTU7 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SCXQ7RTU7 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC4.12□□□□□ -1.75
SCXQ7RTU7 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
SCXQ7RTU7 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
SCXQ7RTU7 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 69.6 ms