Protein–RNA interactions for Protein: Q2M243

CCDC27, Coiled-coil domain-containing protein 27, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC27Q2M243 CCDC171-201ENST00000380701 6512 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 BX284613.1-201ENST00000452221 1641 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 CCR6-202ENST00000349984 2980 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 LCP1-201ENST00000323076 3787 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 NXF4-201ENST00000360035 3617 ntTSL 2 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 ODF2L-202ENST00000317336 4376 ntTSL 5 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 AL139384.2-201ENST00000613809 3590 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 RNU5B-4P-201ENST00000363508 111 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 U3.52-201ENST00000384034 216 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AL023284.3-201ENST00000407767 334 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 SSR1P2-201ENST00000415208 787 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 VNN3-205ENST00000417437 1117 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 MRPS21P5-201ENST00000417885 231 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 RPS26P13-201ENST00000419030 330 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AL589794.1-201ENST00000424971 390 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC092865.3-201ENST00000425390 1026 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 MED6P1-201ENST00000439659 713 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 WDR82P2-201ENST00000444540 928 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 TPT1P1-201ENST00000458495 518 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 RPS4XP17-201ENST00000479057 754 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 EIF1P7-201ENST00000487533 337 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 RPL5P14-201ENST00000494197 878 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC093870.1-201ENST00000506837 213 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC139713.1-202ENST00000512366 460 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 IGLV3-6-201ENST00000523937 250 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC104257.1-202ENST00000524275 884 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 AP002833.2-201ENST00000531585 462 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 OR8K4P-201ENST00000534608 872 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC073864.1-201ENST00000540161 562 ntTSL 4 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 CAPN3-210ENST00000561817 915 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC245100.7-201ENST00000609678 442 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 CPS1-201ENST00000233072 5821 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 BDNF-212ENST00000525528 4766 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 RASGRP3-203ENST00000407811 4210 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 NEMP2-202ENST00000409150 6168 ntAPPRIS P1 TSL 2 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 AC005332.9-201ENST00000620266 2921 ntBASIC8.62□□□□□ -1.03
CCDC27Q2M243 USP37-201ENST00000258399 8032 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 VN1R1-201ENST00000321039 2353 ntAPPRIS P1 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 MEF2C-201ENST00000340208 6192 ntAPPRIS ALT1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC8.62□□□□□ -1.03
CCDC27Q2M243 ELMOD2-201ENST00000323570 4409 ntAPPRIS P1 TSL 1 (best) BASIC8.62□□□□□ -1.03
CCDC27Q2M243 NBPF8-201ENST00000583271 5330 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 AC027279.4-201ENST00000624371 2072 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC8.61□□□□□ -1.03
CCDC27Q2M243 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC8.61□□□□□ -1.03
CCDC27Q2M243 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC27Q2M243 KARSP1-201ENST00000451871 1752 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 TCL6-203ENST00000459662 3307 ntTSL 2 BASIC8.61□□□□□ -1.03
CCDC27Q2M243 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 EEF1A1P12-201ENST00000443590 1346 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC8.61□□□□□ -1.03
CCDC27Q2M243 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC8.61□□□□□ -1.03
CCDC27Q2M243 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 STON2-206ENST00000555447 4302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 MGP-201ENST00000228938 694 ntTSL 3 BASIC8.61□□□□□ -1.03
CCDC27Q2M243 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 SNORD94-201ENST00000386037 137 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC8.61□□□□□ -1.03
CCDC27Q2M243 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 VIM2P-201ENST00000402383 1294 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 MIR1266-201ENST00000408125 84 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 AC092652.1-202ENST00000413315 587 ntTSL 4 BASIC8.61□□□□□ -1.03
CCDC27Q2M243 AL158825.1-201ENST00000414735 521 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 AC008173.1-201ENST00000418901 264 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 AL139415.1-201ENST00000424862 352 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 ZNF736P7Y-201ENST00000425158 820 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 RPS7P2-201ENST00000435134 607 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 ELOCP11-201ENST00000436690 332 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
CCDC27Q2M243 GAPDHP37-201ENST00000442317 968 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 ELOCP13-201ENST00000443934 329 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 ELOCP16-201ENST00000444494 332 ntBASIC8.61□□□□□ -1.03
CCDC27Q2M243 EXOSC3P1-201ENST00000448649 500 ntBASIC8.61□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms