Protein–RNA interactions for Protein: Q00526

CDK3, Cyclin-dependent kinase 3, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3Q00526 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK3Q00526 RN7SL165P-201ENST00000477476 291 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 AC025458.1-201ENST00000506046 166 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK3Q00526 AC025524.2-206ENST00000517953 439 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK3Q00526 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK3Q00526 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK3Q00526 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK3Q00526 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.05□□□□□ -1.44
CDK3Q00526 RNU4ATAC-201ENST00000580972 127 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK3Q00526 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
CDK3Q00526 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK3Q00526 AL353811.1-202ENST00000602614 618 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK3Q00526 AC067773.1-201ENST00000603284 1094 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 AL645933.2-201ENST00000606743 1207 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 AC245014.3-201ENST00000618589 347 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 AL359742.1-201ENST00000622497 540 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 AC022400.9-201ENST00000623633 273 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 AC003992.1-201ENST00000635364 557 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK3Q00526 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK3Q00526 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.05□□□□□ -1.44
CDK3Q00526 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK3Q00526 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK3Q00526 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK3Q00526 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK3Q00526 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK3Q00526 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK3Q00526 POT1-202ENST00000393329 3950 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK3Q00526 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDK3Q00526 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK3Q00526 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDK3Q00526 ZNF610-202ENST00000327920 1855 ntAPPRIS P3 TSL 2 BASIC6.05□□□□□ -1.44
CDK3Q00526 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.05□□□□□ -1.44
CDK3Q00526 AP000866.6-201ENST00000638898 3579 ntBASIC6.05□□□□□ -1.44
CDK3Q00526 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.05□□□□□ -1.44
CDK3Q00526 LMO3-235ENST00000616247 3227 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK3Q00526 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
CDK3Q00526 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK3Q00526 NBPF25P-202ENST00000619932 3827 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK3Q00526 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 SLC9B1P1-201ENST00000331172 1337 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK3Q00526 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC6.04□□□□□ -1.44
CDK3Q00526 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK3Q00526 HSD17B7P1-201ENST00000412419 1017 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AL096829.1-201ENST00000413677 457 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AC013268.2-201ENST00000420753 337 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK3Q00526 RPL12P12-201ENST00000424633 501 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 HMGB1P32-201ENST00000425971 565 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 LINC01133-202ENST00000443364 1266 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK3Q00526 AL512593.1-201ENST00000444758 779 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK3Q00526 CFL1P4-201ENST00000451536 498 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AC007386.1-201ENST00000455212 582 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.04□□□□□ -1.44
CDK3Q00526 MTND3P6-201ENST00000485242 339 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK3Q00526 CCNHP1-201ENST00000513311 678 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK3Q00526 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK3Q00526 AP003396.4-201ENST00000527574 265 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK3Q00526 OR6M2P-201ENST00000529831 871 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AC007956.1-201ENST00000555623 542 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 RPA2P1-201ENST00000556557 721 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
CDK3Q00526 OR4H6P-201ENST00000563771 921 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK3Q00526 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK3Q00526 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.04□□□□□ -1.44
CDK3Q00526 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.04□□□□□ -1.44
CDK3Q00526 MIR6861-201ENST00000618657 64 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 AC092724.1-201ENST00000624623 3397 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 NUMB-229ENST00000557597 3547 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 AOX3P-204ENST00000491025 2107 ntBASIC6.04□□□□□ -1.44
CDK3Q00526 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
CDK3Q00526 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.04□□□□□ -1.44
CDK3Q00526 MLIP-206ENST00000502396 3102 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
CDK3Q00526 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.03□□□□□ -1.44
CDK3Q00526 AC092646.2-201ENST00000431242 2095 ntBASIC6.03□□□□□ -1.44
CDK3Q00526 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.03□□□□□ -1.44
CDK3Q00526 CCNT2P1-201ENST00000423082 1315 ntBASIC6.03□□□□□ -1.44
CDK3Q00526 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CDK3Q00526 NFIA-201ENST00000357977 3200 ntTSL 2 BASIC6.03□□□□□ -1.44
CDK3Q00526 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.9 ms