Protein–RNA interactions for Protein: P78527

PRKDC, DNA-dependent protein kinase catalytic subunit, humanhuman

Known RBP Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDCP78527 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 MCPH1-201ENST00000344683 8039 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 ESPL1-201ENST00000257934 6623 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 MGAT4A-202ENST00000393487 8382 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 AP003170.5-201ENST00000397185 335 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 RPL32P23-201ENST00000397237 405 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 GAPDHP42-201ENST00000406848 981 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 AL359265.2-201ENST00000434367 631 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 RN7SL51P-201ENST00000468230 285 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 AC092375.1-201ENST00000550410 637 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 MIR6716-201ENST00000613413 80 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 AL355974.3-201ENST00000617383 467 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 OR8B1P-202ENST00000641132 1178 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 DNA2-203ENST00000399180 3207 ntTSL 2 BASIC4.07□□□□□ -1.76
PRKDCP78527 DDX3X-217ENST00000629496 5023 ntAPPRIS P1 TSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 TCF20-202ENST00000359486 7410 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 COL25A1-209ENST00000622134 4819 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 NAV2-208ENST00000527559 11171 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 POTEI-201ENST00000451531 7020 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 BNC1-202ENST00000569704 3169 ntAPPRIS ALT2 TSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 SPATA13-202ENST00000382095 6665 ntAPPRIS P3 TSL 2 BASIC4.07□□□□□ -1.76
PRKDCP78527 TMTC1-201ENST00000256062 8805 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC4.07□□□□□ -1.76
PRKDCP78527 CCNB1IP1P2-201ENST00000432876 818 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 RHOT1P3-201ENST00000436571 331 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC4.07□□□□□ -1.76
PRKDCP78527 AL713851.1-201ENST00000438753 918 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 AC004980.4-201ENST00000513375 203 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.07□□□□□ -1.76
PRKDCP78527 BMPR1APS2-201ENST00000527904 1012 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.07□□□□□ -1.76
PRKDCP78527 AC137695.1-201ENST00000604126 489 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.07□□□□□ -1.76
PRKDCP78527 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC4.07□□□□□ -1.76
PRKDCP78527 AC005962.2-201ENST00000611427 652 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 SEMA6D-203ENST00000355997 5908 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 SEMA6D-204ENST00000358066 5913 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
PRKDCP78527 CYP8B1-201ENST00000316161 3974 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRKDCP78527 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC4.07□□□□□ -1.76
PRKDCP78527 TRIM6-205ENST00000445329 2951 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
PRKDCP78527 NLRP3P1-201ENST00000622303 1785 ntBASIC4.07□□□□□ -1.76
PRKDCP78527 ZBTB43-201ENST00000373457 5695 ntAPPRIS P1 BASIC4.07□□□□□ -1.76
PRKDCP78527 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 CREBBP-202ENST00000382070 7598 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.06□□□□□ -1.76
PRKDCP78527 CYP4F32P-201ENST00000426492 504 ntBASIC4.06□□□□□ -1.76
PRKDCP78527 AC091167.1-201ENST00000492017 396 ntBASIC4.06□□□□□ -1.76
PRKDCP78527 AC090058.1-201ENST00000498788 435 ntBASIC4.06□□□□□ -1.76
PRKDCP78527 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKDCP78527 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC4.06□□□□□ -1.76
PRKDCP78527 AC145423.1-201ENST00000605712 336 ntBASIC4.06□□□□□ -1.76
PRKDCP78527 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 MORC2-202ENST00000397641 5181 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 ROBO1-204ENST00000467549 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 DAPK2-213ENST00000612884 8086 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 SLC6A15-201ENST00000266682 4879 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 ITIH6-201ENST00000218436 4968 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 MTMR10-201ENST00000435680 4961 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 KANK1-205ENST00000382297 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 TRPM3-213ENST00000396285 4701 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 RAI14-228ENST00000515799 3486 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 SOGA3-207ENST00000481848 11464 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 FBXL17-203ENST00000496714 3773 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 LINC00598-206ENST00000615947 3541 ntTSL 4 BASIC4.06□□□□□ -1.76
PRKDCP78527 AFG1L-201ENST00000368977 5208 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 DZIP1-202ENST00000361156 7011 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 CCNB3-202ENST00000348603 1201 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 CCNB3-203ENST00000376038 1201 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 RPL12P28-201ENST00000430852 489 ntBASIC4.06□□□□□ -1.76
PRKDCP78527 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC4.06□□□□□ -1.76
PRKDCP78527 AF233439.1-201ENST00000526235 401 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKDCP78527 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC4.06□□□□□ -1.76
PRKDCP78527 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 AL627230.1-201ENST00000613077 211 ntBASIC4.06□□□□□ -1.76
PRKDCP78527 AL591926.8-201ENST00000616876 211 ntBASIC4.06□□□□□ -1.76
PRKDCP78527 AP3B1-201ENST00000255194 5838 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 EREG-201ENST00000244869 4619 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 TACC2-229ENST00000515603 9101 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 AP002026.1-201ENST00000500358 4825 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 SORD-201ENST00000267814 4909 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 CLASP1-201ENST00000263710 8092 ntTSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 CNTN4-205ENST00000427331 4980 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC4.06□□□□□ -1.76
PRKDCP78527 SPART-202ENST00000438666 4789 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
PRKDCP78527 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC4.06□□□□□ -1.76
PRKDCP78527 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 68 ms