Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 GDF9-202ENST00000378673 2640 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 GCNT3-209ENST00000560585 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 SF3B3-201ENST00000302516 9720 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 NOX1-204ENST00000372966 2529 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
GFRA1P56159 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 BCO2-214ENST00000532593 1647 ntTSL 2 BASIC6.47□□□□□ -1.37
GFRA1P56159 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 MAP2-203ENST00000361559 2038 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 ZNF540-202ENST00000343599 3073 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 LINC00690-201ENST00000429949 1365 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 EEF1A1P20-201ENST00000514852 1386 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AC093844.1-201ENST00000514910 1361 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AC083864.3-202ENST00000570271 1755 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 ATXN2-214ENST00000535949 3205 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 AL445250.1-203ENST00000641829 1535 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 SYCP1-202ENST00000369522 3522 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 ST8SIA5-203ENST00000538168 13761 ntTSL 2 BASIC6.47□□□□□ -1.37
GFRA1P56159 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 RNA5SP114-201ENST00000363780 113 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 snoZ40.1-201ENST00000364540 72 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 SNORA70.5-201ENST00000365519 135 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 MIR152-201ENST00000385212 87 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 RNU6-1055P-201ENST00000391085 107 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 RSL24D1P4-201ENST00000400938 484 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 ZNF37CP-201ENST00000406795 241 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.47□□□□□ -1.37
GFRA1P56159 RN7SKP137-201ENST00000411074 307 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 MEAF6P1-201ENST00000416092 327 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.47□□□□□ -1.37
GFRA1P56159 AL354941.1-201ENST00000438600 464 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 ELOCP8-201ENST00000439309 332 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AL592114.2-201ENST00000440142 532 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AL445465.1-204ENST00000440220 447 ntTSL 3 BASIC6.47□□□□□ -1.37
GFRA1P56159 AL138878.2-201ENST00000440581 1241 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 ELOCP15-201ENST00000442090 332 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 OR13K1P-201ENST00000444577 975 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AL109741.2-201ENST00000455561 343 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 CCNJP2-201ENST00000457810 1163 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 RN7SL870P-201ENST00000460111 296 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 WBP1LP1-201ENST00000460451 896 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 MBNL1-213ENST00000465907 945 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 GLRXP3-201ENST00000470810 321 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 LINC01085-203ENST00000511195 326 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 RNU6-759P-201ENST00000516740 103 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC6.47□□□□□ -1.37
GFRA1P56159 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC6.47□□□□□ -1.37
GFRA1P56159 AP001803.1-201ENST00000525668 147 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AC087783.1-201ENST00000527135 564 ntTSL 4 BASIC6.47□□□□□ -1.37
GFRA1P56159 GLYATL1P4-201ENST00000529326 906 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 SAA3P-201ENST00000533267 365 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC6.47□□□□□ -1.37
GFRA1P56159 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 AC068790.6-201ENST00000602558 258 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AC064872.1-201ENST00000604823 1072 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AC004448.4-210ENST00000610229 833 ntTSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 AL031777.2-201ENST00000611953 196 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AC009163.6-201ENST00000612367 342 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AC116165.3-201ENST00000614524 400 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AC009283.1-201ENST00000615852 645 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AL359715.5-201ENST00000623431 443 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 AL049536.1-201ENST00000625043 744 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 JAKMIP2-AS1-202ENST00000627433 831 ntTSL 3 BASIC6.47□□□□□ -1.37
GFRA1P56159 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 PCDH15-231ENST00000617271 6425 ntAPPRIS P3 TSL 5 BASIC6.47□□□□□ -1.37
GFRA1P56159 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC6.47□□□□□ -1.37
GFRA1P56159 RNF14-204ENST00000394519 4173 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 ZNF733P-202ENST00000444809 1573 ntBASIC6.47□□□□□ -1.37
GFRA1P56159 MFAP3L-203ENST00000393704 5827 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
GFRA1P56159 CDK15-201ENST00000260967 1635 ntAPPRIS P3 TSL 1 (best) BASIC6.47□□□□□ -1.37
GFRA1P56159 FOXP2-201ENST00000350908 2638 ntAPPRIS P2 TSL 1 (best) BASIC6.46□□□□□ -1.37
GFRA1P56159 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.37
GFRA1P56159 GAPVD1-201ENST00000265956 2667 ntTSL 5 BASIC6.46□□□□□ -1.37
GFRA1P56159 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC6.46□□□□□ -1.37
GFRA1P56159 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
GFRA1P56159 MLLT10-202ENST00000377059 4850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
GFRA1P56159 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.37
GFRA1P56159 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
GFRA1P56159 AC090220.1-201ENST00000593078 1699 ntBASIC6.46□□□□□ -1.37
GFRA1P56159 NPIPB5-209ENST00000517539 3569 ntAPPRIS P2 TSL 5 BASIC6.46□□□□□ -1.37
GFRA1P56159 DYRK1A-201ENST00000338785 5498 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
GFRA1P56159 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
GFRA1P56159 ZNF793-207ENST00000587986 3869 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
GFRA1P56159 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
GFRA1P56159 Z99129.4-201ENST00000624649 2435 ntBASIC6.46□□□□□ -1.38
GFRA1P56159 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
GFRA1P56159 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC6.46□□□□□ -1.38
GFRA1P56159 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC6.46□□□□□ -1.38
GFRA1P56159 IGSF11-201ENST00000354673 3206 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
GFRA1P56159 RNA5SP472-201ENST00000363868 119 ntBASIC6.46□□□□□ -1.38
GFRA1P56159 RNU12-2P-201ENST00000364789 156 ntBASIC6.46□□□□□ -1.38
GFRA1P56159 RNA5SP442-201ENST00000365050 107 ntBASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms