Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.31□□□□□ -1.24
NUP98P52948 HMGB1P42-201ENST00000532126 553 ntBASIC7.31□□□□□ -1.24
NUP98P52948 AP002754.2-201ENST00000542121 462 ntTSL 5 BASIC7.31□□□□□ -1.24
NUP98P52948 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC7.31□□□□□ -1.24
NUP98P52948 GMFG-212ENST00000602185 423 ntTSL 3 BASIC7.31□□□□□ -1.24
NUP98P52948 AL355974.3-201ENST00000617383 467 ntBASIC7.31□□□□□ -1.24
NUP98P52948 AL035661.1-201ENST00000620459 1144 ntBASIC7.31□□□□□ -1.24
NUP98P52948 AL390318.1-201ENST00000624564 687 ntBASIC7.31□□□□□ -1.24
NUP98P52948 AC007683.2-201ENST00000624681 714 ntBASIC7.31□□□□□ -1.24
NUP98P52948 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC7.31□□□□□ -1.24
NUP98P52948 CTNND1-201ENST00000358694 6135 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 AL031651.1-201ENST00000615357 1438 ntBASIC7.31□□□□□ -1.24
NUP98P52948 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC7.31□□□□□ -1.24
NUP98P52948 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC7.31□□□□□ -1.24
NUP98P52948 TCF4-278ENST00000636400 8343 ntTSL 5 BASIC7.31□□□□□ -1.24
NUP98P52948 RAD17P2-201ENST00000451754 1977 ntBASIC7.31□□□□□ -1.24
NUP98P52948 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC7.31□□□□□ -1.24
NUP98P52948 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC7.31□□□□□ -1.24
NUP98P52948 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NUP98P52948 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 AL159987.1-201ENST00000347911 293 ntBASIC7.31□□□□□ -1.24
NUP98P52948 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NUP98P52948 MIR130A-201ENST00000385274 89 ntBASIC7.31□□□□□ -1.24
NUP98P52948 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC7.31□□□□□ -1.24
NUP98P52948 AL133173.1-201ENST00000423458 397 ntBASIC7.31□□□□□ -1.24
NUP98P52948 TNPO1P1-201ENST00000423641 1138 ntBASIC7.31□□□□□ -1.24
NUP98P52948 RN7SL547P-201ENST00000490793 290 ntBASIC7.31□□□□□ -1.24
NUP98P52948 HSPE1P2-201ENST00000554777 306 ntBASIC7.31□□□□□ -1.24
NUP98P52948 MIR132-201ENST00000591554 101 ntBASIC7.31□□□□□ -1.24
NUP98P52948 AC004948.1-201ENST00000609858 672 ntBASIC7.31□□□□□ -1.24
NUP98P52948 CASC19-248ENST00000641674 1356 ntBASIC7.31□□□□□ -1.24
NUP98P52948 AC005034.3-201ENST00000604845 1747 ntBASIC7.31□□□□□ -1.24
NUP98P52948 NAA25-201ENST00000261745 6010 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 GTF2IP4-201ENST00000453092 2054 ntBASIC7.31□□□□□ -1.24
NUP98P52948 MYH15-201ENST00000273353 7074 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 ADH7-202ENST00000437033 2516 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC7.31□□□□□ -1.24
NUP98P52948 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
NUP98P52948 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
NUP98P52948 AC092724.1-201ENST00000624623 3397 ntBASIC7.3□□□□□ -1.24
NUP98P52948 AP001636.3-201ENST00000533954 2810 ntTSL 2 BASIC7.3□□□□□ -1.24
NUP98P52948 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
NUP98P52948 AC130304.1-201ENST00000622942 2385 ntBASIC7.3□□□□□ -1.24
NUP98P52948 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NUP98P52948 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
NUP98P52948 RN7SKP160-201ENST00000363804 340 ntBASIC7.3□□□□□ -1.24
NUP98P52948 OR14A2-201ENST00000366485 945 ntAPPRIS P1 BASIC7.3□□□□□ -1.24
NUP98P52948 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NUP98P52948 TMA16P2-201ENST00000413187 601 ntBASIC7.3□□□□□ -1.24
NUP98P52948 NANOGP4-201ENST00000427230 913 ntBASIC7.3□□□□□ -1.24
NUP98P52948 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC7.3□□□□□ -1.24
NUP98P52948 AP000365.1-201ENST00000438850 546 ntTSL 4 BASIC7.3□□□□□ -1.24
NUP98P52948 LINC01780-202ENST00000457683 391 ntTSL 3 BASIC7.3□□□□□ -1.24
NUP98P52948 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC7.3□□□□□ -1.24
NUP98P52948 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
NUP98P52948 MINCR-206ENST00000524335 499 ntTSL 2 BASIC7.3□□□□□ -1.24
NUP98P52948 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC7.3□□□□□ -1.24
NUP98P52948 MIR1269B-201ENST00000580405 75 ntBASIC7.3□□□□□ -1.24
NUP98P52948 MIR4311-201ENST00000580794 100 ntBASIC7.3□□□□□ -1.24
NUP98P52948 AC104365.1-202ENST00000587080 398 ntTSL 3 BASIC7.3□□□□□ -1.24
NUP98P52948 PPATP2-201ENST00000605635 508 ntBASIC7.3□□□□□ -1.24
NUP98P52948 HOTTIP_3.1-201ENST00000619957 337 ntBASIC7.3□□□□□ -1.24
NUP98P52948 CASC22-202ENST00000628396 802 ntTSL 5 BASIC7.3□□□□□ -1.24
NUP98P52948 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC7.3□□□□□ -1.24
NUP98P52948 ABCA1-202ENST00000374736 10494 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NUP98P52948 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC7.3□□□□□ -1.24
NUP98P52948 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC7.3□□□□□ -1.24
NUP98P52948 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NUP98P52948 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NUP98P52948 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NUP98P52948 AL355377.1-201ENST00000621125 1653 ntBASIC7.3□□□□□ -1.24
NUP98P52948 MID1-205ENST00000380785 6092 ntAPPRIS P1 TSL 2 BASIC7.3□□□□□ -1.24
NUP98P52948 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
NUP98P52948 CASP12-212ENST00000613512 1451 ntAPPRIS P5 TSL 1 (best) BASIC7.3□□□□□ -1.24
NUP98P52948 MARK2P4-201ENST00000503381 2380 ntBASIC7.29□□□□□ -1.24
NUP98P52948 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 TRRAP-201ENST00000355540 12590 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
NUP98P52948 SYT4-201ENST00000255224 4110 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 AC096775.1-201ENST00000437724 448 ntBASIC7.29□□□□□ -1.24
NUP98P52948 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC7.29□□□□□ -1.24
NUP98P52948 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC7.29□□□□□ -1.24
NUP98P52948 AC026348.1-201ENST00000462549 1053 ntBASIC7.29□□□□□ -1.24
NUP98P52948 TSACC-207ENST00000470342 601 ntTSL 2 BASIC7.29□□□□□ -1.24
NUP98P52948 DUTP7-201ENST00000507982 486 ntBASIC7.29□□□□□ -1.24
NUP98P52948 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC7.29□□□□□ -1.24
NUP98P52948 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 AC005840.5-201ENST00000619166 599 ntBASIC7.29□□□□□ -1.24
NUP98P52948 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC7.29□□□□□ -1.24
NUP98P52948 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC7.29□□□□□ -1.24
NUP98P52948 TRPM8-201ENST00000324695 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
NUP98P52948 OSBPL9-203ENST00000428468 2893 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms