Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 RNA5SP333-201ENST00000363466 118 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 RNA5SP334-201ENST00000364825 118 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 RNU6-171P-201ENST00000384354 107 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 NPM1P36-201ENST00000415681 835 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 AL513325.1-201ENST00000417716 1034 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
HCFC1P51610 NMD3P2-201ENST00000421815 761 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC5.34□□□□□ -1.55
HCFC1P51610 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC5.34□□□□□ -1.55
HCFC1P51610 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC5.34□□□□□ -1.55
HCFC1P51610 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.34□□□□□ -1.55
HCFC1P51610 RPS23P6-201ENST00000466136 431 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
HCFC1P51610 PFN1P6-201ENST00000476786 399 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.55
HCFC1P51610 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC5.34□□□□□ -1.55
HCFC1P51610 AC008429.4-201ENST00000521201 182 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC5.34□□□□□ -1.55
HCFC1P51610 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HCFC1P51610 AC007066.2-202ENST00000566531 914 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
HCFC1P51610 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC5.34□□□□□ -1.55
HCFC1P51610 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.34□□□□□ -1.55
HCFC1P51610 AL445647.2-201ENST00000615170 130 ntBASIC5.34□□□□□ -1.55
HCFC1P51610 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HCFC1P51610 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC5.34□□□□□ -1.55
HCFC1P51610 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
HCFC1P51610 AC006511.3-201ENST00000624929 1783 ntBASIC5.34□□□□□ -1.56
HCFC1P51610 AC110373.1-201ENST00000505994 3505 ntBASIC5.34□□□□□ -1.56
HCFC1P51610 GJB6-205ENST00000636852 1840 ntAPPRIS P1 TSL 4 BASIC5.34□□□□□ -1.56
HCFC1P51610 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HCFC1P51610 UNC13B-209ENST00000635942 14550 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HCFC1P51610 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC5.33□□□□□ -1.56
HCFC1P51610 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HCFC1P51610 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HCFC1P51610 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
HCFC1P51610 TPT1-204ENST00000379060 764 ntTSL 5 BASIC5.33□□□□□ -1.56
HCFC1P51610 Z93019.1-201ENST00000416450 973 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC5.33□□□□□ -1.56
HCFC1P51610 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.33□□□□□ -1.56
HCFC1P51610 AL445466.1-201ENST00000448432 357 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 RPL23AP60-201ENST00000450011 454 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC5.33□□□□□ -1.56
HCFC1P51610 AC115223.1-201ENST00000466377 870 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 RPS4XP14-201ENST00000493072 781 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.33□□□□□ -1.56
HCFC1P51610 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC5.33□□□□□ -1.56
HCFC1P51610 AP001885.1-201ENST00000621658 558 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC5.33□□□□□ -1.56
HCFC1P51610 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC5.33□□□□□ -1.56
HCFC1P51610 AC097634.1-201ENST00000604491 2467 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
HCFC1P51610 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HCFC1P51610 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
HCFC1P51610 AC009404.1-201ENST00000420330 3090 ntTSL 3 BASIC5.33□□□□□ -1.56
HCFC1P51610 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.33□□□□□ -1.56
HCFC1P51610 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC5.33□□□□□ -1.56
HCFC1P51610 AC089998.1-201ENST00000548575 3141 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HCFC1P51610 SERPINB11-205ENST00000544088 1846 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
HCFC1P51610 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC5.33□□□□□ -1.56
HCFC1P51610 FUNDC2P3-201ENST00000334716 533 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 OR7E101P-201ENST00000400428 513 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.33□□□□□ -1.56
HCFC1P51610 BX323845.3-201ENST00000428215 527 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 SUMO2P1-206ENST00000445436 284 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC5.33□□□□□ -1.56
HCFC1P51610 AC026348.1-201ENST00000462549 1053 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.33□□□□□ -1.56
HCFC1P51610 RN7SL165P-201ENST00000477476 291 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 RPL17P2-201ENST00000491913 451 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 AC006499.3-201ENST00000506077 748 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC5.33□□□□□ -1.56
HCFC1P51610 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HCFC1P51610 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC5.33□□□□□ -1.56
HCFC1P51610 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC5.33□□□□□ -1.56
HCFC1P51610 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC5.33□□□□□ -1.56
HCFC1P51610 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.33□□□□□ -1.56
HCFC1P51610 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.33□□□□□ -1.56
HCFC1P51610 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.33□□□□□ -1.56
HCFC1P51610 RPL12P48-201ENST00000605620 304 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 TCL6_3.1-201ENST00000619064 137 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 MIR6719-201ENST00000622428 87 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 AC020763.5-201ENST00000623298 430 ntBASIC5.33□□□□□ -1.56
HCFC1P51610 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.33□□□□□ -1.56
HCFC1P51610 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
HCFC1P51610 BRCA1-221ENST00000493795 5732 ntTSL 5 BASIC5.32□□□□□ -1.56
HCFC1P51610 AC004014.2-201ENST00000623718 5122 ntBASIC5.32□□□□□ -1.56
HCFC1P51610 PLCXD3-202ENST00000377801 7704 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 SUN3-203ENST00000412142 1448 ntTSL 5 BASIC5.32□□□□□ -1.56
HCFC1P51610 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 LINC01602-201ENST00000522992 2109 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 AC125793.1-201ENST00000565238 1493 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 ERLIN2-201ENST00000276461 6073 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
HCFC1P51610 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
HCFC1P51610 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms