Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 EMC3-AS1-205ENST00000438698 534 ntBASIC6.37□□□□□ -1.39
HADHAP40939 AC023274.2-201ENST00000445264 521 ntBASIC6.37□□□□□ -1.39
HADHAP40939 AC007383.1-201ENST00000445875 636 ntBASIC6.37□□□□□ -1.39
HADHAP40939 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.37□□□□□ -1.39
HADHAP40939 RN7SL221P-201ENST00000466190 281 ntBASIC6.37□□□□□ -1.39
HADHAP40939 RN7SL643P-201ENST00000471845 291 ntBASIC6.37□□□□□ -1.39
HADHAP40939 RN7SL568P-201ENST00000493069 298 ntBASIC6.37□□□□□ -1.39
HADHAP40939 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC6.37□□□□□ -1.39
HADHAP40939 IGHV4-55-201ENST00000520889 368 ntBASIC6.37□□□□□ -1.39
HADHAP40939 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 OR4A40P-201ENST00000533878 948 ntBASIC6.37□□□□□ -1.39
HADHAP40939 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC6.37□□□□□ -1.39
HADHAP40939 AL357153.3-201ENST00000553982 611 ntTSL 3 BASIC6.37□□□□□ -1.39
HADHAP40939 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC6.37□□□□□ -1.39
HADHAP40939 AC090651.1-201ENST00000567865 634 ntBASIC6.37□□□□□ -1.39
HADHAP40939 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC6.37□□□□□ -1.39
HADHAP40939 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC6.37□□□□□ -1.39
HADHAP40939 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.37□□□□□ -1.39
HADHAP40939 AC073046.2-201ENST00000604756 527 ntBASIC6.37□□□□□ -1.39
HADHAP40939 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 AL008723.3-201ENST00000608926 449 ntBASIC6.37□□□□□ -1.39
HADHAP40939 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.37□□□□□ -1.39
HADHAP40939 DNM1P47-203ENST00000571780 12667 ntBASIC6.37□□□□□ -1.39
HADHAP40939 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HADHAP40939 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HADHAP40939 AC112255.1-201ENST00000624070 2493 ntBASIC6.37□□□□□ -1.39
HADHAP40939 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
HADHAP40939 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.37□□□□□ -1.39
HADHAP40939 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.37□□□□□ -1.39
HADHAP40939 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
HADHAP40939 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.36□□□□□ -1.39
HADHAP40939 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
HADHAP40939 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
HADHAP40939 AC124312.1-201ENST00000551312 1325 ntAPPRIS P5 TSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 RNU1-59P-201ENST00000364829 162 ntBASIC6.36□□□□□ -1.39
HADHAP40939 RNU11-6P-201ENST00000391127 133 ntBASIC6.36□□□□□ -1.39
HADHAP40939 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 RPL21P50-201ENST00000417698 477 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.36□□□□□ -1.39
HADHAP40939 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.36□□□□□ -1.39
HADHAP40939 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.36□□□□□ -1.39
HADHAP40939 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.36□□□□□ -1.39
HADHAP40939 AC092967.1-201ENST00000449016 481 ntBASIC6.36□□□□□ -1.39
HADHAP40939 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.36□□□□□ -1.39
HADHAP40939 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.36□□□□□ -1.39
HADHAP40939 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 RN7SL714P-201ENST00000487050 298 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AOX3P-204ENST00000491025 2107 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 RNA5SP418-201ENST00000515951 117 ntBASIC6.36□□□□□ -1.39
HADHAP40939 RN7SKP183-201ENST00000517169 324 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 CYCSP25-201ENST00000525280 316 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AP001000.1-201ENST00000526843 742 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AC135983.3-201ENST00000528049 1226 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AC009729.1-201ENST00000548873 1133 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AC107958.1-201ENST00000556576 290 ntBASIC6.36□□□□□ -1.39
HADHAP40939 MT1CP-201ENST00000567054 174 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.36□□□□□ -1.39
HADHAP40939 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.36□□□□□ -1.39
HADHAP40939 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 NDUFB9P1-201ENST00000604683 510 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AL589740.1-209ENST00000607032 1056 ntTSL 3 BASIC6.36□□□□□ -1.39
HADHAP40939 AL021368.3-201ENST00000607119 578 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC6.36□□□□□ -1.39
HADHAP40939 U1.25-201ENST00000614085 162 ntBASIC6.36□□□□□ -1.39
HADHAP40939 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 U1.34-201ENST00000618578 162 ntBASIC6.36□□□□□ -1.39
HADHAP40939 U1.31-201ENST00000620022 160 ntBASIC6.36□□□□□ -1.39
HADHAP40939 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.36□□□□□ -1.39
HADHAP40939 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC6.36□□□□□ -1.39
HADHAP40939 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.36□□□□□ -1.39
HADHAP40939 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.36□□□□□ -1.39
HADHAP40939 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.36□□□□□ -1.39
HADHAP40939 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HADHAP40939 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HADHAP40939 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.35□□□□□ -1.39
HADHAP40939 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HADHAP40939 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HADHAP40939 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
HADHAP40939 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
HADHAP40939 AL136984.1-201ENST00000607611 1893 ntBASIC6.35□□□□□ -1.39
HADHAP40939 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 565.2 ms