Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RFC3P40938 AL133329.1-201ENST00000437466 478 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC3P40938 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC3P40938 MIR4435-2HG-214ENST00000453478 560 ntTSL 4 BASIC5.69□□□□□ -1.5
RFC3P40938 HLA-DPA3-207ENST00000454398 229 ntBASIC5.69□□□□□ -1.5
RFC3P40938 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC5.69□□□□□ -1.5
RFC3P40938 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC5.69□□□□□ -1.5
RFC3P40938 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC3P40938 AP004609.2-201ENST00000532177 190 ntBASIC5.69□□□□□ -1.5
RFC3P40938 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC3P40938 AC097467.4-201ENST00000605504 141 ntBASIC5.69□□□□□ -1.5
RFC3P40938 AC073389.3-201ENST00000609434 935 ntBASIC5.69□□□□□ -1.5
RFC3P40938 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.69□□□□□ -1.5
RFC3P40938 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.69□□□□□ -1.5
RFC3P40938 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFC3P40938 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.69□□□□□ -1.5
RFC3P40938 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RFC3P40938 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.69□□□□□ -1.5
RFC3P40938 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 HSPD1P9-201ENST00000420325 1636 ntBASIC5.69□□□□□ -1.5
RFC3P40938 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.69□□□□□ -1.5
RFC3P40938 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC5.69□□□□□ -1.5
RFC3P40938 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RFC3P40938 PARP4P1-201ENST00000435945 2337 ntBASIC5.69□□□□□ -1.5
RFC3P40938 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC5.69□□□□□ -1.5
RFC3P40938 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC5.69□□□□□ -1.5
RFC3P40938 AC140134.1-201ENST00000511830 3544 ntBASIC5.69□□□□□ -1.5
RFC3P40938 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
RFC3P40938 AC105749.1-201ENST00000631338 2008 ntBASIC5.69□□□□□ -1.5
RFC3P40938 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RFC3P40938 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RFC3P40938 CHN1-204ENST00000409597 1445 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 PCAT5-201ENST00000626667 3550 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RFC3P40938 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC3P40938 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RFC3P40938 AL050335.1-201ENST00000396909 869 ntBASIC5.68□□□□□ -1.5
RFC3P40938 AL132875.1-201ENST00000403623 949 ntBASIC5.68□□□□□ -1.5
RFC3P40938 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 AP001610.2-201ENST00000415820 422 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 AC066692.1-201ENST00000421721 457 ntBASIC5.68□□□□□ -1.5
RFC3P40938 MRPS21P2-201ENST00000424704 264 ntBASIC5.68□□□□□ -1.5
RFC3P40938 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 AC016724.1-201ENST00000453215 421 ntBASIC5.68□□□□□ -1.5
RFC3P40938 VPS25P1-201ENST00000455691 508 ntBASIC5.68□□□□□ -1.5
RFC3P40938 AC023194.2-201ENST00000465398 406 ntBASIC5.68□□□□□ -1.5
RFC3P40938 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.68□□□□□ -1.5
RFC3P40938 AC010181.1-202ENST00000509191 798 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 AC090568.1-201ENST00000509499 856 ntBASIC5.68□□□□□ -1.5
RFC3P40938 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC3P40938 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC3P40938 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 RNA5SP340-201ENST00000517132 107 ntBASIC5.68□□□□□ -1.5
RFC3P40938 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 AL121579.2-201ENST00000555466 590 ntBASIC5.68□□□□□ -1.5
RFC3P40938 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 AC009120.3-201ENST00000563335 499 ntBASIC5.68□□□□□ -1.5
RFC3P40938 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC5.68□□□□□ -1.5
RFC3P40938 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.68□□□□□ -1.5
RFC3P40938 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC3P40938 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC3P40938 AC125494.2-201ENST00000602431 657 ntBASIC5.68□□□□□ -1.5
RFC3P40938 AL583832.1-201ENST00000603227 784 ntBASIC5.68□□□□□ -1.5
RFC3P40938 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.68□□□□□ -1.5
RFC3P40938 AC010998.3-201ENST00000613871 631 ntBASIC5.68□□□□□ -1.5
RFC3P40938 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC3P40938 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC3P40938 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC5.68□□□□□ -1.5
RFC3P40938 LINC01741-201ENST00000427173 1666 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 TRAPPC3L-201ENST00000356128 2421 ntTSL 2 BASIC5.68□□□□□ -1.5
RFC3P40938 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC5.68□□□□□ -1.5
RFC3P40938 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RFC3P40938 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
RFC3P40938 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RFC3P40938 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.67□□□□□ -1.5
RFC3P40938 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RFC3P40938 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
RFC3P40938 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
RFC3P40938 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms