Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
HOXC6P09630 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
HOXC6P09630 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC6P09630 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HOXC6P09630 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC6P09630 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC6P09630 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXC6P09630 AC025263.1-201ENST00000501387 2538 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC6P09630 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC6P09630 POLR2B-202ENST00000381227 4108 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.3
HOXC6P09630 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC6P09630 RAD17P2-201ENST00000451754 1977 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 RPS15AP30-201ENST00000420976 390 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 AC097721.1-201ENST00000427150 1253 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXC6P09630 AL163193.1-201ENST00000444895 788 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 TSACC-207ENST00000470342 601 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC6P09630 AC068522.1-201ENST00000482895 345 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC6.9□□□□□ -1.3
HOXC6P09630 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXC6P09630 AC008429.4-201ENST00000521201 182 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 AC110056.1-201ENST00000525759 911 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXC6P09630 AC073916.1-201ENST00000545095 130 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 C16orf52-205ENST00000567004 951 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
HOXC6P09630 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.9□□□□□ -1.3
HOXC6P09630 AP000864.1-201ENST00000609424 650 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 AC243571.1-201ENST00000615743 478 ntTSL 3 BASIC6.9□□□□□ -1.3
HOXC6P09630 OR2L8-201ENST00000623922 939 ntAPPRIS P1 BASIC6.9□□□□□ -1.3
HOXC6P09630 AL034408.1-201ENST00000637712 664 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 AC005618.1-201ENST00000606901 3148 ntBASIC6.9□□□□□ -1.3
HOXC6P09630 Z93929.1-201ENST00000418200 1475 ntBASIC6.9□□□□□ -1.31
HOXC6P09630 USP46-201ENST00000441222 7954 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC6P09630 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC6P09630 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC6P09630 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.9□□□□□ -1.31
HOXC6P09630 SCYL3-201ENST00000367770 2916 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC6P09630 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.9□□□□□ -1.31
HOXC6P09630 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.9□□□□□ -1.31
HOXC6P09630 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXC6P09630 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HOXC6P09630 VPS39-202ENST00000348544 2661 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 DZIP3-201ENST00000361582 5350 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 AC110373.1-201ENST00000505994 3505 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 ZC2HC1B-201ENST00000237275 1002 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 SNORA64.1-201ENST00000362600 132 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 RN7SKP128-201ENST00000364270 303 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 RNA5SP500-201ENST00000364486 119 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXC6P09630 AC016739.1-201ENST00000405359 345 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 LINC00383-201ENST00000433664 817 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC6P09630 AC108066.1-201ENST00000437261 596 ntTSL 4 BASIC6.89□□□□□ -1.31
HOXC6P09630 AC002504.1-201ENST00000438281 691 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 AC006482.1-201ENST00000448898 273 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC6P09630 AC016027.4-201ENST00000450866 277 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 IGKV2-18-201ENST00000522607 343 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC6P09630 AP004607.6-201ENST00000525033 1202 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC6.89□□□□□ -1.31
HOXC6P09630 AC006530.1-201ENST00000555980 571 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC6.89□□□□□ -1.31
HOXC6P09630 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.89□□□□□ -1.31
HOXC6P09630 AC104695.2-201ENST00000605056 775 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 MIR6719-201ENST00000622428 87 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXC6P09630 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.89□□□□□ -1.31
HOXC6P09630 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXC6P09630 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC6.89□□□□□ -1.31
HOXC6P09630 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 AL359091.1-201ENST00000449048 1734 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HOXC6P09630 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.89□□□□□ -1.31
HOXC6P09630 SYTL2-220ENST00000529581 1910 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXC6P09630 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC6.89□□□□□ -1.31
HOXC6P09630 EXD1-202ENST00000458580 2177 ntAPPRIS ALT2 TSL 2 BASIC6.89□□□□□ -1.31
HOXC6P09630 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXC6P09630 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC6.89□□□□□ -1.31
HOXC6P09630 AC010329.1-201ENST00000593903 8328 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 ADAM20P1-202ENST00000556964 3034 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.89□□□□□ -1.31
HOXC6P09630 AL591848.4-201ENST00000567832 3472 ntBASIC6.89□□□□□ -1.31
HOXC6P09630 TCF4-225ENST00000564999 3590 ntAPPRIS P3 TSL 5 BASIC6.89□□□□□ -1.31
HOXC6P09630 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
HOXC6P09630 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC6P09630 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC6P09630 GTF2E1-201ENST00000283875 3012 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
HOXC6P09630 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC6.88□□□□□ -1.31
HOXC6P09630 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.88□□□□□ -1.31
HOXC6P09630 AC112243.1-201ENST00000623949 3851 ntBASIC6.88□□□□□ -1.31
HOXC6P09630 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms