Protein–RNA interactions for Protein: O95155

UBE4B, Ubiquitin conjugation factor E4 B, humanhuman

Predictions only

Length 1,302 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4BO95155 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.64□□□□□ -1.35
UBE4BO95155 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.64□□□□□ -1.35
UBE4BO95155 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.64□□□□□ -1.35
UBE4BO95155 AL136097.3-201ENST00000611097 505 ntBASIC6.64□□□□□ -1.35
UBE4BO95155 MIR6721-201ENST00000617181 87 ntBASIC6.64□□□□□ -1.35
UBE4BO95155 AL355974.3-201ENST00000617383 467 ntBASIC6.64□□□□□ -1.35
UBE4BO95155 AC069234.4-201ENST00000621276 412 ntBASIC6.64□□□□□ -1.35
UBE4BO95155 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.64□□□□□ -1.35
UBE4BO95155 AJ009632.2-205ENST00000635225 1169 ntTSL 5 BASIC6.64□□□□□ -1.35
UBE4BO95155 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UBE4BO95155 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
UBE4BO95155 RBMY1HP-201ENST00000382759 1389 ntBASIC6.64□□□□□ -1.35
UBE4BO95155 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.64□□□□□ -1.35
UBE4BO95155 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
UBE4BO95155 CCDC77-201ENST00000239830 2371 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
UBE4BO95155 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
UBE4BO95155 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.64□□□□□ -1.35
UBE4BO95155 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UBE4BO95155 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.64□□□□□ -1.35
UBE4BO95155 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UBE4BO95155 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UBE4BO95155 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
UBE4BO95155 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC6.64□□□□□ -1.35
UBE4BO95155 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
UBE4BO95155 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
UBE4BO95155 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.63□□□□□ -1.35
UBE4BO95155 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 AC245096.1-201ENST00000413104 546 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC6.63□□□□□ -1.35
UBE4BO95155 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.63□□□□□ -1.35
UBE4BO95155 CUBNP2-201ENST00000443534 1139 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 CTSLP6-201ENST00000458273 1002 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 AC104164.1-201ENST00000460282 590 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 AC083795.1-201ENST00000491760 320 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 RNA5SP473-201ENST00000516402 125 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.63□□□□□ -1.35
UBE4BO95155 H2AFV-208ENST00000521529 439 ntTSL 5 BASIC6.63□□□□□ -1.35
UBE4BO95155 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.63□□□□□ -1.35
UBE4BO95155 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.63□□□□□ -1.35
UBE4BO95155 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.63□□□□□ -1.35
UBE4BO95155 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.63□□□□□ -1.35
UBE4BO95155 AC092332.1-201ENST00000563684 829 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.63□□□□□ -1.35
UBE4BO95155 AC068768.2-201ENST00000602352 343 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 AC073333.2-201ENST00000603589 769 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 AL591926.1-201ENST00000620542 217 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 UBA3-213ENST00000631029 123 ntTSL 5 BASIC6.63□□□□□ -1.35
UBE4BO95155 RIPK1-202ENST00000380409 3864 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.63□□□□□ -1.35
UBE4BO95155 RASSF8-216ENST00000615708 1328 ntTSL 5 BASIC6.63□□□□□ -1.35
UBE4BO95155 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.63□□□□□ -1.35
UBE4BO95155 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC6.63□□□□□ -1.35
UBE4BO95155 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
UBE4BO95155 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 AC099654.3-201ENST00000447087 1546 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC6.63□□□□□ -1.35
UBE4BO95155 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 HSPD1P9-201ENST00000420325 1636 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 ATP5A1P4-201ENST00000556888 1605 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 FGG-201ENST00000336098 1659 ntTSL 2 BASIC6.63□□□□□ -1.35
UBE4BO95155 ZNF101P1-201ENST00000435701 1720 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.63□□□□□ -1.35
UBE4BO95155 MAPK10-270ENST00000641102 3538 ntBASIC6.63□□□□□ -1.35
UBE4BO95155 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
UBE4BO95155 RABGEF1-202ENST00000380828 3864 ntTSL 2 BASIC6.63□□□□□ -1.35
UBE4BO95155 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
UBE4BO95155 PTPRD-206ENST00000397617 8248 ntTSL 5 BASIC6.62□□□□□ -1.35
UBE4BO95155 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.62□□□□□ -1.35
UBE4BO95155 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
UBE4BO95155 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.62□□□□□ -1.35
UBE4BO95155 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.62□□□□□ -1.35
UBE4BO95155 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
UBE4BO95155 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC6.62□□□□□ -1.35
UBE4BO95155 TINAG-201ENST00000259782 1754 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
UBE4BO95155 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
UBE4BO95155 GPR65-201ENST00000267549 4522 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
UBE4BO95155 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
UBE4BO95155 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
UBE4BO95155 OR2L2-201ENST00000366479 1134 ntAPPRIS P1 BASIC6.62□□□□□ -1.35
UBE4BO95155 LIX1L-AS1-202ENST00000412239 570 ntTSL 2 BASIC6.62□□□□□ -1.35
UBE4BO95155 LINC01114-201ENST00000421071 482 ntTSL 3 BASIC6.62□□□□□ -1.35
UBE4BO95155 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.62□□□□□ -1.35
UBE4BO95155 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.62□□□□□ -1.35
UBE4BO95155 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC6.62□□□□□ -1.35
UBE4BO95155 EEF1B2P3-201ENST00000447718 678 ntBASIC6.62□□□□□ -1.35
UBE4BO95155 AC093166.3-201ENST00000448785 303 ntBASIC6.62□□□□□ -1.35
UBE4BO95155 SDC4P-201ENST00000453285 601 ntBASIC6.62□□□□□ -1.35
UBE4BO95155 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.62□□□□□ -1.35
UBE4BO95155 AC092865.4-201ENST00000477936 615 ntBASIC6.62□□□□□ -1.35
UBE4BO95155 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
UBE4BO95155 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.62□□□□□ -1.35
UBE4BO95155 HSD3BP3-201ENST00000514706 994 ntBASIC6.62□□□□□ -1.35
UBE4BO95155 RN7SKP67-201ENST00000515905 235 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 85.4 ms