Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 SNORA26.10-201ENST00000516427 141 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 ASB8-203ENST00000535988 679 ntTSL 2 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 DEFB109F-202ENST00000542600 509 ntTSL 2 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AC020978.7-201ENST00000575953 1187 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AC012368.3-201ENST00000604190 219 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AP000240.1-201ENST00000609910 452 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 AL122023.1-201ENST00000622847 530 ntBASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 SELE-204ENST00000367776 3576 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 SELE-205ENST00000367777 3576 ntTSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 OR10G4-202ENST00000641521 3623 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
TCRBV7S3A2A0A539 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC016583.1-201ENST00000624221 2431 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 PIGA-216ENST00000637296 2113 ntTSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 GIGYF2-246ENST00000629305 7878 ntTSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 PPP4R1L-209ENST00000497138 4680 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 NAV1-201ENST00000367295 11645 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 SNORA64.3-201ENST00000365647 134 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AL512504.1-201ENST00000415494 778 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 SEC63P1-201ENST00000425785 1258 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC245884.2-201ENST00000426257 404 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 RPL31P53-201ENST00000457065 348 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 KCNIP2-211ENST00000461105 858 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 RN7SL352P-201ENST00000466002 277 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC124945.1-201ENST00000485133 188 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC112184.1-201ENST00000505179 312 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC021151.1-201ENST00000506933 183 ntTSL 3 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 TOMM22P4-201ENST00000511318 336 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 RNA5SP434-201ENST00000516647 121 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 CYCSP25-201ENST00000525280 316 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC012065.3-201ENST00000602736 439 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 SNORA74.4-201ENST00000607595 199 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC016542.1-201ENST00000608259 493 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AL136097.3-201ENST00000611097 505 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC021422.1-201ENST00000621212 473 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 OXSM-209ENST00000626005 309 ntTSL 3 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 SOX9-AS1-218ENST00000628742 733 ntTSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AL161756.3-201ENST00000641216 2071 ntBASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 GDPD4-201ENST00000315938 2533 ntAPPRIS P2 TSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
TCRBV7S3A2A0A539 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.19□□□□□ -1.42
TCRBV7S3A2A0A539 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 128.2 ms