Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 RNF41-212ENST00000615206 5216 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 GPI-202ENST00000415930 4000 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 MEF2A-205ENST00000557942 5413 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AL096816.1-201ENST00000623300 2920 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 WDR19-207ENST00000506503 2513 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 PPIH-201ENST00000304979 752 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 DEFB124-201ENST00000317676 216 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AL731537.1-201ENST00000343087 421 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 TAC1-203ENST00000350485 975 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 RNU6-374P-201ENST00000364146 108 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 SNORA70G-201ENST00000383923 142 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 RNU6-116P-201ENST00000384042 109 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 TRBV6-1-201ENST00000390353 401 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 IL6-203ENST00000401651 539 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 RPL17P12-201ENST00000413391 526 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC012594.1-235ENST00000424391 727 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 TRIM60P3Y-201ENST00000432201 673 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 HMGB1P45-201ENST00000435986 653 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC01508-202ENST00000436671 755 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC034238.2-201ENST00000445660 567 ntTSL 4 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AL139237.1-201ENST00000446107 513 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 GCNT1P5-201ENST00000449274 682 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 ZEB1-AS1-204ENST00000450834 576 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AL391361.2-202ENST00000454826 439 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 MTND1P11-201ENST00000456661 876 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 DNAJC9-AS1-203ENST00000457758 548 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 SSU72P8-201ENST00000473520 585 ntAPPRIS P1 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC105910.1-201ENST00000482585 483 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 TAOK3-209ENST00000537952 2147 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 COPZ1-215ENST00000552362 575 ntTSL 4 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 GSTZ1-216ENST00000556627 919 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 GTF2IP8-201ENST00000560687 584 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 CCDC58P1-201ENST00000578567 430 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 MIR4266-201ENST00000583300 55 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC090578.1-201ENST00000604955 591 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 U1.22-201ENST00000605806 164 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 ACACA-232ENST00000614438 569 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AL353608.4-201ENST00000624487 1188 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC012594.1-254ENST00000628002 438 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 PPP3R2-202ENST00000636434 1081 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 NXT2-203ENST00000372106 2562 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 SLC7A8-206ENST00000469263 3557 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC011592.1-201ENST00000624647 3634 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 WDR64-204ENST00000437684 2310 ntTSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 ACTG2-203ENST00000409731 1413 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 AC135352.1-201ENST00000506173 1418 ntBASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 TFRC-203ENST00000420415 4814 ntAPPRIS ALT2 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 MITF-202ENST00000314589 1993 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 REV3L-203ENST00000368805 10461 ntAPPRIS P1 TSL 5 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 DTNA-226ENST00000596745 1508 ntTSL 2 BASIC7.68□□□□□ -1.18
PCDHGA11Q9Y5H2 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC092646.2-201ENST00000431242 2095 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 RAD51B-212ENST00000488612 1550 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 CPM-202ENST00000546373 2116 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 LARP7-201ENST00000324052 2164 ntAPPRIS P1 TSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 LDAH-208ENST00000435420 3837 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AL049634.1-201ENST00000453770 1720 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 PDIK1L-202ENST00000374271 4279 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 TDRKH-201ENST00000368822 3093 ntAPPRIS P2 TSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 NAMPTP1-201ENST00000440465 2514 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 AC093297.3-201ENST00000607056 2517 ntBASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 OR4F5-201ENST00000335137 1054 ntAPPRIS P1 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 MUC1-209ENST00000368396 516 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 MUC1-210ENST00000368398 729 ntTSL 1 (best) BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 FHL1-203ENST00000370676 833 ntTSL 5 BASIC7.67□□□□□ -1.18
PCDHGA11Q9Y5H2 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms